RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CGB2Q6NT52 195 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 C16orf46Q6P387 395 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 C6orf89Q6UWU4 347 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 GDPD4Q6W3E5 623 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CERS6Q6ZMG9 384 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 FAM47EQ6ZV65 393 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 OTOAQ7RTW8 1153 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 TBC1D1Q86TI0 1168 aaPredicted RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 ZSWIM9Q86XI8 627 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CENPLQ8N0S6 344 aaPredicted RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 PLD6Q8N2A8 252 aaKnown RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 STK40Q8N2I9 435 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 PAF1Q8N7H5 531 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 ZNF398Q8TD17 642 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CSGALNACT1Q8TDX6 532 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 LPGAT1Q92604 370 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 EID2BQ96D98 161 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 C7orf26Q96N11 449 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 SMIM14Q96QK8 99 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
ERBB3-210ENST00000549472 TSSK1BQ9BXA7 367 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CIPCQ9C0C6 399 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 EPS15L1Q9UBC2 864 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 DKK3Q9UBP4 350 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 CDH22Q9UJ99 828 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 COMMD10Q9Y6G5 202 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 SLC30A1Q9Y6M5 507 aa11.86□□□□□ -0.51
ERBB3-210ENST00000549472 TTC34A8MYJ7 566 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 SNNO75324 88 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 H2AFYO75367 372 aaKnown RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 NDUFS3O75489 264 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 SLC4A1P02730 911 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 UGT2B4P06133 528 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ZNF30P17039 623 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 SAT1P21673 171 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 FDXRP22570 491 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ALDH3A1P30838 453 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 CHI3L2Q15782 390 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 FAM83EQ2M2I3 478 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 AGAP9Q5VTM2 703 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ZNF549Q6P9A3 640 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 YTHDF3Q7Z739 585 aaKnown RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 TERB1Q8NA31 727 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 CHST14Q8NCH0 376 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 GRIN3AQ8TCU5 1115 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 CYB5D2Q8WUJ1 264 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ZFYVE19Q96K21 471 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 UBXN10Q96LJ8 280 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 TTC1Q99614 292 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 OLFM1Q99784 485 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
ERBB3-210ENST00000549472 MECRQ9BV79 373 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 BRD9Q9H8M2 597 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 GPAMQ9HCL2 828 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ZNF358Q9NW07 568 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 PLA2G4CQ9UP65 541 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 ARL2BPQ9Y2Y0 163 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
ERBB3-210ENST00000549472 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 GRXCR2A6NFK2 248 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 OTOL1A6NHN0 477 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 TARM1B6A8C7 271 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 G3V2L1 256 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 BNIP3LO60238 219 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 SRP72O76094 671 aaKnown RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 CLDN7O95471 211 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 SERPINE1P05121 402 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 LTA4HP09960 611 aaKnown RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 FGF3P11487 239 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 CYP2A6P11509 494 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 GDI1P31150 447 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 SPAM1P38567 509 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 PTGER3P43115 390 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 OCRLQ01968 901 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 BST1Q10588 318 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 STX3Q13277 289 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 PTPRRQ15256 657 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 SMAD2Q15796 467 aaKnown RBP11.84□□□□□ -0.51
ERBB3-210ENST00000549472 GPR33Q49SQ1 333 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 ZRANB3Q5FWF4 1079 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 LYPLAL1Q5VWZ2 237 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 LRRC8EQ6NSJ5 796 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 PSAPL1Q6NUJ1 521 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 KLC3Q6P597 504 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 CRTC1Q6UUV9 634 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 ZYG11AQ6WRX3 759 aa11.84□□□□□ -0.51
ERBB3-210ENST00000549472 SNX20Q7Z614 316 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms