RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 HCAR3P49019 387 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CSRP3P50461 194 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ZNF135P52742 658 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 PEX6Q13608 980 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ARMC12Q5T9G4 340 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 USP45Q70EL2 814 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ZNF438Q7Z4V0 828 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 TRIM74Q86UV6 250 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ZNF761Q86XN6 746 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 FAM129CQ86XR2 697 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 PSTKQ8IV42 348 aaKnown RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 NAGSQ8N159 534 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 IL22RA1Q8N6P7 574 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 FNIP1Q8TF40 1166 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 HTR3CQ8WXA8 447 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 ART4Q93070 314 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 TAAR9Q96RI9 348 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 SYT11Q9BT88 431 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 XPO4Q9C0E2 1151 aaKnown RBP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CDH19Q9H159 772 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 STARD5Q9NSY2 213 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAB5C-203ENST00000546881 KCNK4Q9NYG8 393 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 SCINQ9Y6U3 715 aa11.44□□□□□ -0.58
RAB5C-203ENST00000546881 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 PSMD11O00231 422 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 PPM1DO15297 605 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 MAFKO60675 156 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 PGLSO95336 258 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 ASMTLO95671 621 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 TPM1P09493 284 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 FGF3P11487 239 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-203ENST00000546881 TCF4P15884 667 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 ITGB6P18564 788 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 CR2P20023 1033 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 IL1R2P27930 398 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 GPR3P46089 330 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 LIMK2P53671 638 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 NR1D2Q14995 579 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 CLCA4Q14CN2 919 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 SNAP47Q5SQN1 464 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 MARC1Q5VT66 337 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 RFLNAQ6ZTI6 216 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-203ENST00000546881 C17orf82Q86X59 251 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-203ENST00000546881 NRSN1Q8IZ57 195 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 AGBL5Q8NDL9 886 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 CPLX3Q8WVH0 158 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 NKD1Q969G9 470 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 AP2M1Q96CW1 435 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 SCRN2Q96FV2 425 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 AHCYL2Q96HN2 611 aaKnown RBP11.43□□□□□ -0.58
RAB5C-203ENST00000546881 SMIM14Q96QK8 99 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 OR2M4Q96R27 311 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 MGME1Q9BQP7 344 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 MRPL47Q9HD33 250 aaKnown RBP11.43□□□□□ -0.58
RAB5C-203ENST00000546881 NT5MQ9NPB1 228 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 TMEM9Q9P0T7 183 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 MYO6Q9UM54 1294 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 SLC17A4Q9Y2C5 497 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 ST14Q9Y5Y6 855 aa11.43□□□□□ -0.58
RAB5C-203ENST00000546881 AHCTF1Q8WYP5 2266 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 IGHV1OR21-1A0A087WYE8 117 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 EFCAB7A8K855 629 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 A8MU76 341 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-203ENST00000546881 DDX3XO00571 662 aaKnown RBP eCLIP11.42□□□□□ -0.587e-9■■■□□ 17.5
RAB5C-203ENST00000546881 INPP4BO15327 924 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 PEX11BO96011 259 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 IVLP07476 585 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 SKILP12757 684 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 LIFP15018 202 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 CSF2RBP32927 897 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 SERPINB6P35237 376 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
RAB5C-203ENST00000546881 EPHB1P54762 984 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 CDH6P55285 790 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 KLHL30Q0D2K2 578 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.58
RAB5C-203ENST00000546881 KRT81Q14533 505 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 DPYSL2Q16555 572 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 CLPPQ16740 277 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-203ENST00000546881 LRRC66Q68CR7 880 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 BORAQ6PGQ7 559 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 POLNQ7Z5Q5 900 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 PTRH1Q86Y79 214 aaKnown RBP11.42□□□□□ -0.58
RAB5C-203ENST00000546881 GALNT13Q8IUC8 556 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 CACNA2D3Q8IZS8 1091 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 OR4D9Q8NGE8 314 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 SCAMP4Q969E2 229 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 TRIM11Q96F44 468 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 CSPG4P5Q96PW8 444 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 SLC38A3Q99624 504 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 TRIM5Q9C035 493 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 B3GNT4Q9C0J1 378 aa11.42□□□□□ -0.58
RAB5C-203ENST00000546881 ABCG8Q9H221 673 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms