RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CSPG5O95196 566 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 SYF2O95926 243 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 TMEM191BP0C7N4 346 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 HOXB2P14652 356 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 NAGAP17050 411 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 FBLP22087 321 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 HOXC9P31274 260 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 HNRNPH1P31943 449 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 RAD23BP54727 409 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 RRP1P56182 461 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 CALD1Q05682 793 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 EFNB3Q15768 340 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 RARS2Q5T160 578 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 OTUD1Q5VV17 481 aaPredicted RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 RPUSD3Q6P087 351 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 OR8K5Q8NH50 307 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 TRPC4APQ8TEL6 797 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 FIZ1Q96SL8 496 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 MMP25Q9NPA2 562 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 FBXW11Q9UKB1 542 aa6.4□□□□□ -1.38
LEMD3-206ENST00000545026 EXO1Q9UQ84 846 aaKnown RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 MAGED1Q9Y5V3 778 aaPredicted RBP6.4□□□□□ -1.38
LEMD3-206ENST00000545026 RPS10-NUDT3A0A1W2PQS6 291 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 GLOD5A6NK44 160 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 H3BQ06 376 aaPredicted RBP6.39□□□□□ -1.39
LEMD3-206ENST00000545026 VWA5AO00534 786 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 PPEF2O14830 753 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 ADAMDEC1O15204 470 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 RGS14O43566 566 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 HIST1H2ABP04908 130 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 DDX5P17844 614 aaKnown RBP6.39□□□□□ -1.39
LEMD3-206ENST00000545026 HIST1H2ADP20671 130 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 PRCPP42785 496 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 SUOXP51687 545 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 PNLIPRP2P54317 469 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 PPATQ06203 517 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 HIST3H2AQ7L7L0 130 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 ABHD1Q96SE0 405 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 SH3GL2Q99962 352 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 ACSS1Q9NUB1 689 aaPredicted RBP6.39□□□□□ -1.39
LEMD3-206ENST00000545026 POT1Q9NUX5 634 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 COPG2Q9UBF2 871 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 SLC9A2Q9UBY0 812 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 CDC14AQ9UNH5 594 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 FAM169AQ9Y6X4 670 aa6.39□□□□□ -1.39
LEMD3-206ENST00000545026 SPRY3O43610 288 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 ZIC3O60481 467 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 GPC4O75487 556 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 ICAM1P05362 532 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 PSG1P11464 419 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 UBA1P22314 1058 aaKnown RBP6.38□□□□□ -1.39
LEMD3-206ENST00000545026 GPR143P51810 404 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 GPS2Q13227 327 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 PNLIPRP3Q17RR3 467 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 DNTTIP2Q5QJE6 756 aaKnown RBP6.38□□□□□ -1.39
LEMD3-206ENST00000545026 FNBP1LQ5T0N5 605 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 ZNF280DQ6N043 979 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 COLCA1Q6ZS62 124 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 CACNA2D4Q7Z3S7 1137 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 AACSQ86V21 672 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 DNAAF5Q86Y56 855 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 LRFN5Q96NI6 719 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 GCNAQ96QF7 691 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 PAFAH2Q99487 392 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 PIGMQ9H3S5 423 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.38□□□□□ -1.39
LEMD3-206ENST00000545026 ELOVL5Q9NYP7 299 aa6.38□□□□□ -1.39
LEMD3-206ENST00000545026 MARCH4Q9P2E8 410 aaPredicted RBP6.38□□□□□ -1.39
LEMD3-206ENST00000545026 ZNF644Q9H582 1327 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 IGHV4-28A0A0C4DH34 117 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 DNAJC9-AS1A6NH13 148 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 LRRC72A6NJI9 287 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 SOCS2O14508 198 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 MOSPD3O75425 235 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 MMP9P14780 707 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 TRIM21P19474 475 aaKnown RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 RFX2P48378 723 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 STAT2P52630 851 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 GRIK2Q13002 908 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 TNFAIP1Q13829 316 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 KCNC3Q14003 757 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 RASA2Q15283 850 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 ZNF805Q5CZA5 627 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 PPP6R3Q5H9R7 873 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 FSCBQ5H9T9 825 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 C11orf87Q6NUJ2 197 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 TAOK1Q7L7X3 1001 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 SDCCAG8Q86SQ7 713 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 ZC3HC1Q86WB0 502 aaKnown RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 SCYL3Q8IZE3 742 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 SYT2Q8N9I0 419 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-206ENST00000545026 KCTD6Q8NC69 237 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 APOL6Q9BWW8 343 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 KLHL4Q9C0H6 718 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 OSGEPL1Q9H4B0 414 aa6.37□□□□□ -1.39
LEMD3-206ENST00000545026 CNGB3Q9NQW8 809 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms