RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MYO1FO00160 1098 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TNFRSF10CO14798 259 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 MFSD11O43934 449 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PGLSO95336 258 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 MAP3K6O95382 1288 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PDHA1P08559 390 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PNLIPP16233 465 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 CASP14P31944 242 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 ETV3P41162 512 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 POLE2P56282 527 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TAS2R40P59535 323 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 KCNAB2Q13303 367 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 DPYSL3Q14195 570 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 KRT81Q14533 505 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 CERCAMQ5T4B2 595 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PHF19Q5T6S3 580 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TMEM164Q5U3C3 297 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 DENND2CQ68D51 928 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 CLEC18BQ6UXF7 455 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 RFLNAQ6ZTI6 216 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 Q6ZVL8 140 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TMPRSS9Q7Z410 1059 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 SPRED1Q7Z699 444 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TAF8Q7Z7C8 310 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 TSPAN33Q86UF1 283 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 CLEC18CQ8NCF0 446 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 LRRN4Q8WUT4 740 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PIH1D2Q8WWB5 315 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 NUS1Q96E22 293 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PACSIN1Q9BY11 444 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 B3GNT4Q9C0J1 378 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 SEMA6CQ9H3T2 930 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 WDR26Q9H7D7 661 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 CYP4F12Q9HCS2 524 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 RCOR3Q9P2K3 495 aaPredicted RBP11.84□□□□□ -0.51
GABPB1-206ENST00000543881 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 SDK2Q58EX2 2172 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 RELNP78509 3460 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 A0A1W2PQ67 120 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 PRSS38A1L453 326 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 GOLGA6L19H0YKK7 550 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 FZD6O60353 706 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 CEACAM5P06731 702 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MYCLP1P12525 358 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 CTPS1P17812 591 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 KELP23276 732 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SERPINB6P35237 376 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 GJC1P36383 396 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 CASRP41180 1078 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 GARSP41250 739 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 GALNT2Q10471 571 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 PAFAH1B3Q15102 231 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 HEATR4Q86WZ0 1026 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 NRROSQ86YC3 692 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 BBS5Q8N3I7 341 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 FAM46DQ8NEK8 389 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 IQCDQ96DY2 449 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 DTD2Q96FN9 168 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 TEX101Q9BY14 249 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 LRIT1Q9P2V4 623 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ST14Q9Y5Y6 855 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 B4DGG1 531 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 PROSCO94903 275 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SOD1P00441 154 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 CCL4P13236 92 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 DSC2Q02487 901 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ARHGEF7Q14155 803 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 HLTFQ14527 1009 aaKnown RBP eCLIP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 C16orf72Q14CZ0 275 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ANKRD20A8PQ5CZ79 823 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 RALGPS1Q5JS13 557 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 ARMC12Q5T9G4 340 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 TECPR1Q7Z6L1 1165 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 LRRC49Q8IUZ0 686 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 NSMCE1Q8WV22 266 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MAML1Q92585 1016 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 FRMD8Q9BZ67 464 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SUDS3Q9H7L9 328 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 RDH14Q9HBH5 336 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 AKAP7Q9P0M2 348 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-206ENST00000543881 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
GABPB1-206ENST00000543881 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms