RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ATAD3AQ9NVI7 634 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 IGSF9Q9P2J2 1179 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 EIF3LQ9Y262 564 aaKnown RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 BIRC5O15392 142 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ARHGEF9O43307 516 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 LIMK2P53671 638 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 MTTPP55157 894 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CRY1Q16526 586 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 UBXN11Q5T124 520 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 FBXL19Q6PCT2 694 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TMC5Q6UXY8 1006 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 MILR1Q7Z6M3 343 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 C14orf80Q86SX3 495 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TRAPPC5Q8IUR0 188 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 RELL1Q8IUW5 271 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 SLC44A2Q8IWA5 706 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ZFAND2BQ8WV99 257 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 SLC7A6OSQ96CW6 309 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 C7orf26Q96N11 449 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 COG4Q9H9E3 785 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ZC4H2Q9NQZ6 224 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TCAF1Q9Y4C2 921 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 PLIN3O60664 434 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 C8AP07357 584 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CYBAP13498 195 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 PIK3R1P27986 724 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 MLLT6P55198 1093 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 PGS1Q32NB8 556 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ZIK1Q3SY52 487 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-218ENST00000482171 IL27RAQ6UWB1 636 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 USP45Q70EL2 814 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 STK32CQ86UX6 486 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 FAM162AQ96A26 154 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ESAMQ96AP7 390 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 KLQ9UEF7 1012 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
SMPD4-218ENST00000482171 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 NDST3O95803 873 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PCNAP12004 261 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SOAT1P35610 550 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SCNN1AP37088 669 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PSME3P61289 254 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SMARCB1Q12824 385 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DMC1Q14565 340 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 HECTD2Q5U5R9 776 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 LIPMQ5VYY2 423 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DNAJB7Q7Z6W7 309 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 MRPL57Q9BQC6 102 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TEX264Q9Y6I9 313 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 THSD7AQ9UPZ6 1657 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CCL5P13501 91 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SPDYE7PQ495Y7 208 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 RNF19BQ6ZMZ0 732 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 FAM156AQ8NDB6 213 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 OR56A4Q8NGH8 313 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DCAKDQ8WVC6 231 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ZFYVE19Q96K21 471 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 RNF145Q96MT1 663 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 LENG8Q96PV6 779 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 NPAS2Q99743 824 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 NMUR1Q9HB89 426 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PARVBQ9HBI1 364 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TMLHEQ9NVH6 421 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 VTI1BQ9UEU0 232 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 GNG14A0A1W2PPG7 69 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 OR6B1O95007 311 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 IL1BP01584 269 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 FGBP02675 491 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SYN1P17600 705 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TTPAP49638 278 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SAMD4BQ5PRF9 694 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SERPINA13PQ6UXR4 307 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CAMK1DQ8IU85 385 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 OR13C4Q8NGS5 318 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ITFG2Q969R8 447 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 LINGO1Q96FE5 620 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 HAPLN3Q96S86 360 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 HBEGFQ99075 208 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TIMMDC1Q9NPL8 285 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ENPP3O14638 875 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms