RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 HACD3Q9P035 362 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 SOX13Q9UN79 622 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 PLAAQ9Y263 795 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 TCAF1Q9Y4C2 921 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 MYLKQ15746 1914 aa13.28□□□□□ -0.28
BRAT1-205ENST00000473879 TP53BP1Q12888 1972 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-205ENST00000473879 MED19A0JLT2 244 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-205ENST00000473879 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 ANKRD66B4E2M5 251 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-205ENST00000473879 PLRG1O43660 514 aaKnown RBP13.27□□□□□ -0.29
BRAT1-205ENST00000473879 USP1O94782 785 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 PRLP01236 227 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 TPH1P17752 444 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 PAMP19021 973 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.29
BRAT1-205ENST00000473879 POLR2LP62875 67 aaKnown RBP13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CRADDP78560 199 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CNTN1Q12860 1018 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 GRIK2Q13002 908 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 SEPT6Q14141 434 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 BRAT1Q6PJG6 821 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 GDPD4Q6W3E5 623 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CAPN12Q6ZSI9 719 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 IGDCC3Q8IVU1 814 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 CHST14Q8NCH0 376 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 NSMCE3Q96MG7 304 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 KIFC1Q9BW19 673 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 PPCSQ9HAB8 311 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 TM9SF3Q9HD45 589 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 SLCO1B1Q9Y6L6 691 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 RPS6KL1Q9Y6S9 549 aa13.27□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3EA0A087X179 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3KA0A087X1G2 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TSPAN11A1L157 253 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3FA6NER0 549 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PLK4O00444 970 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 LATO43561 262 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PLXNA2O75051 1894 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 KCNK5O95279 499 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 CRTAMO95727 393 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 UGT2B4P06133 528 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PDHA1P08559 390 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 SSTR1P30872 391 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 GKP32189 559 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 GPX6P59796 221 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 RACK1P63244 317 aaKnown RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PDE1BQ01064 536 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 BNC1Q01954 994 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 GPS2Q13227 327 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 SLC14A1Q13336 389 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 FRG1Q14331 258 aaKnown RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 STAT4Q14765 748 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 CRYMQ14894 314 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TEAD4Q15561 434 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 QPCTQ16769 361 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 KLHL38Q2WGJ6 581 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PIP5KL1Q5T9C9 394 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 AGBL4Q5VU57 503 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3GQ6DHY5 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF449Q6P9G9 518 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 IL27RAQ6UWB1 636 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 USP45Q70EL2 814 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TMEM135Q86UB9 458 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 IQCKQ8N0W5 287 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 BRSK1Q8TDC3 778 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PIH1D2Q8WWB5 315 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PEX13Q92968 403 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF669Q96BR6 464 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ECHDC3Q96DC8 303 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PPP1R16AQ96I34 528 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 ZIM3Q96PE6 472 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 TRABDQ9H4I3 376 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 EBF2Q9HAK2 575 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 PREBQ9HCU5 417 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 DYRK4Q9NR20 520 aa13.26□□□□□ -0.29
BRAT1-205ENST00000473879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms