RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ASB4Q9Y574 426 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PXDNLA1KZ92 1463 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SALL3Q9BXA9 1300 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CHD2O14647 1828 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 BCL9O00512 1426 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CRB1P82279 1406 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 A0A087X0M5 115 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1B0GX30 115 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MFSD2BA6NFX1 497 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CCDC160A6NGH7 325 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 C22orf46C9J442 243 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PLK4O00444 970 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SEC14L5O43304 696 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GAS2O43903 313 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CUTAO60888 179 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CCNB2O95067 398 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ITGBL1O95965 494 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LCKP06239 509 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CYC1P08574 325 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GPC1P35052 558 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 BMPR1AP36894 532 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 VHLP40337 213 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ACTR1BP42025 376 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 IL2P60568 153 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GUCY1A3Q02108 690 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SNAPC2Q13487 334 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ATP1A4Q13733 1029 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SEC23AQ15436 765 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 FAM187BQ17R55 369 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 Q5PR19 223 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 FAM160B1Q5W0V3 765 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 STEAP3Q658P3 488 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KCTD11Q693B1 232 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DARS2Q6PI48 645 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KLHDC10Q6PID8 442 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SZRD1Q7Z422 152 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 C16orf71Q8IYS4 520 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ARFGAP2Q8N6H7 521 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF781Q8N8C0 355 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ANKLE1Q8NAG6 615 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 BBS1Q8NFJ9 593 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CMASQ8NFW8 434 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 OR5M1Q8NGP8 315 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 OR2W6PQ8NHA6 318 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PNPT1Q8TCS8 783 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ZDHHC1Q8WTX9 485 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 RHBDF1Q96CC6 855 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SCLYQ96I15 445 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 NEU1Q99519 415 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MEIS3Q99687 375 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 POTEKPQ9BYX7 375 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 RACGAP1Q9H0H5 632 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 RANBP3Q9H6Z4 567 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CYP3A43Q9HB55 503 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MRPS30Q9NP92 439 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 NRIP3Q9NQ35 241 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 AGPAT5Q9NUQ2 364 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 THG1LQ9NWX6 298 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PKD2L1Q9P0L9 805 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 TJP2Q9UDY2 1190 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 USP18Q9UMW8 372 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ARL2BPQ9Y2Y0 163 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 UTP11Q9Y3A2 253 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MN1Q10571 1320 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MROH7Q68CQ1 1323 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 A0A0A0MRY4 1105 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1W2PQU0 124 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 GMNCA6NCL1 334 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 C5orf60A6NFR6 353 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 MARCH11A6NNE9 402 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 C12orf71A8MTZ7 269 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 FOXE1O00358 373 aaPredicted RBP4.96□□□□□ -1.61
EPHA3-202ENST00000452448 UBE2CO00762 179 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 CXCL11O14625 94 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 VILLO15195 856 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 SLC16A6O15403 523 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PEX10O60683 326 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 UGDHO60701 494 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 EIF1BO60739 113 aaKnown RBP4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PPP6R2O75170 966 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 SCO1O75880 301 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 RHOBTB1O94844 696 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 EPOP01588 193 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PLCG1P19174 1290 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PDCP20941 246 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 NR2F2P24468 414 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PTAFRP25105 342 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 LCN1P31025 176 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 EIF1P41567 113 aaKnown RBP4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PHKA2P46019 1235 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 ARSEP51690 589 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 LUMP51884 338 aaPredicted RBP4.96□□□□□ -1.61
EPHA3-202ENST00000452448 PGDP52209 483 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 TAS2R60P59551 318 aa4.96□□□□□ -1.61
EPHA3-202ENST00000452448 MEF2AQ02078 507 aaPredicted RBP4.96□□□□□ -1.61
EPHA3-202ENST00000452448 CYP27A1Q02318 531 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms