RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRKCZQ05513 592 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 CHRNDQ07001 517 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 CHAF1AQ13111 956 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 CUL4BQ13620 913 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TRIM14Q14142 442 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 BRD3Q15059 726 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 JMJD6Q6NYC1 403 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 USP43Q70EL4 1123 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 FASTKD5Q7L8L6 764 aaKnown RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 CERS5Q8N5B7 392 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 LINS1Q8NG48 757 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 WFIKKN2Q8TEU8 576 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TXNDC15Q96J42 360 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 DOCK7Q96N67 2140 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 DUX5Q96PT3 197 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 IL25Q9H293 177 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 RETREG1Q9H6L5 497 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TDRD3Q9H7E2 651 aaKnown RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TLR8Q9NR97 1041 aaKnown RBP5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 TMOD2Q9NZR1 351 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 MDFICQ9P1T7 246 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 ZSWIM8A7E2V4 1837 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 SPEF2Q9C093 1822 aa5.04□□□□□ -1.6
HMGB3P5-201ENST00000428894 ALPK3Q96L96 1907 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 SCN5AQ14524 2016 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 A0A1B0GVM2 712 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 ANKRD18BA2A2Z9 1011 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 SRRM3A6NNA2 597 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 CXCL11O14625 94 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 TNPO2O14787 897 aaKnown RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 PTPN9P43378 593 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 AARSP49588 968 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 MXI1P50539 228 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 UBE4AQ14139 1066 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 KRT24Q2M2I5 525 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 EFHC1Q5JVL4 640 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 FKBP1CQ5VVH2 108 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 CCDC174Q6PII3 467 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 FTSJ3Q8IY81 847 aaKnown RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 SPICE1Q8N0Z3 855 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 SETD9Q8NE22 299 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 OR4N2Q8NGD1 307 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 GPT2Q8TD30 523 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 TBC1D22AQ8WUA7 517 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 ZKSCAN4Q969J2 545 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 FAM122AQ96E09 287 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 LBHD1Q9BQE6 289 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 MSTO1Q9BUK6 570 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 TMEM39BQ9GZU3 492 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 CTDSP1Q9GZU7 261 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 C11orf49Q9H6J7 331 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 DDX31Q9H8H2 851 aaKnown RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 WDR6Q9NNW5 1121 aaKnown RBP5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 SAYSD1Q9NPB0 183 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 PCDHAC2Q9Y5I4 1007 aa5.03□□□□□ -1.6
HMGB3P5-201ENST00000428894 DNAH12Q6ZR08 3092 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 LOC102724159A0A0B4J2E5 919 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 SLC16A5O15375 505 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 TNNT1P13805 278 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 SETQ01105 290 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 CALD1Q05682 793 aaKnown RBP5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 PWP2Q15269 919 aaKnown RBP5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM76BQ5HYJ3 339 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 SH2D4BQ5SQS7 431 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM83BQ5T0W9 1011 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 CCDC30Q5VVM6 783 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 RETSATQ6NUM9 610 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 RASSF8Q8NHQ8 419 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 TEKT1Q969V4 418 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 GUCD1Q96NT3 240 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 PPP1R10Q96QC0 940 aaKnown RBP5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 MYH16Q9H6N6 1097 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 CLK4Q9HAZ1 481 aaKnown RBP5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 ATP8A2Q9NTI2 1148 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 TAGLN3Q9UI15 199 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 KCNG2Q9UJ96 466 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 SLC45A1Q9Y2W3 748 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 ARAP2Q8WZ64 1704 aa5.02□□□□□ -1.61
HMGB3P5-201ENST00000428894 A0A087WYN8 130 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 PI4KAP2A4QPH2 592 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 HBP1O60381 514 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 FRAT2O75474 233 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 FAM155BO75949 473 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 ADORA2A-AS1P86434 159 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 CYP4A11Q02928 519 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 POU3F1Q03052 451 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 GOLGA8FQ08AF8 430 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 RPE65Q16518 533 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 ME3Q16798 604 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 GHDCQ8N2G8 530 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 PI4KAP1Q8N8J0 262 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 LILRB1Q8NHL6 650 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 TDRD7Q8NHU6 1098 aaKnown RBP5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 IGSF21Q96ID5 467 aa5.01□□□□□ -1.61
HMGB3P5-201ENST00000428894 PAGR1Q9BTK6 254 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms