RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CH25HO95992 272 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 MCM3P25205 808 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 LMO1P25800 156 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 ACSL1P33121 698 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 DEKP35659 375 aaKnown RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 FASLGP48023 281 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 MRPS34P82930 218 aaKnown RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 ECT2LQ008S8 904 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 TFAP4Q01664 338 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 SETMARQ53H47 684 aaPredicted RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 RAB41Q5JT25 222 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 KIAA0930Q6ICG6 404 aaPredicted RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 ZNF549Q6P9A3 640 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 TAOK1Q7L7X3 1001 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 CACNA2D4Q7Z3S7 1137 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 CHERPQ8IWX8 916 aaKnown RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 WFIKKN2Q8TEU8 576 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 NSMCE1Q8WV22 266 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 MIB2Q96AX9 1013 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 PHF21BQ96EK2 531 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 MAGIXQ9H6Y5 334 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 C17orf75Q9HAS0 396 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 SUCLA2Q9P2R7 463 aaPredicted RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 UBA2Q9UBT2 640 aaPredicted RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 FBXL17Q9UF56 701 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 MYO6Q9UM54 1294 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 IGLV5-52A0A0A0MRZ9 124 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 A0A1W2PR77 199 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 AKR1B15C9JRZ8 316 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 PLRG1O43660 514 aaKnown RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 AHCYL1O43865 530 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 GJB3O75712 270 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 DDNO94850 711 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 G6PDP11413 515 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 C21orf33P30042 268 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 WTAPQ15007 396 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 AMZ1Q400G9 498 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 LRIF1Q5T3J3 769 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 FRG2Q64ET8 278 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 CLEC17AQ6ZS10 378 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 HJURPQ8NCD3 748 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 OR14A16Q8NHC5 309 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 SECISBP2LQ93073 1101 aaKnown RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 ZKSCAN4Q969J2 545 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 ELMOD3Q96FG2 381 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 TXNDC15Q96J42 360 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 EGLN2Q96KS0 407 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 HARBI1Q96MB7 349 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 FTOQ9C0B1 505 aaKnown RBP eCLIP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 RSPH9Q9H1X1 276 aaPredicted RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 NDST4Q9H3R1 872 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 CNGB3Q9NQW8 809 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 MTMR10Q9NXD2 777 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 ADD3Q9UEY8 706 aaKnown RBP4.46□□□□□ -1.69
CCDC54-201ENST00000261058 CLIC4Q9Y696 253 aa4.46□□□□□ -1.69
CCDC54-201ENST00000261058 hCG_1807616A0A1W2PRN6 198 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 C1orf226A1L170 272 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 TSPAN9O75954 239 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 BMP15O95972 392 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 RB1P06400 928 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SRPRAP08240 638 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SCP2P22307 547 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 UBA1P22314 1058 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 HOXA11P31270 313 aaPredicted RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 CAMPP49913 170 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 HNRNPH2P55795 449 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 EGR4Q05215 589 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 TRAF2Q12933 501 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 RARS2Q5T160 578 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 TYW3Q6IPR3 259 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 LCN10Q6JVE6 187 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 NRROSQ86YC3 692 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SRBD1Q8N5C6 995 aaKnown RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 NEUROD6Q96NK8 337 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 PCGF1Q9BSM1 259 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SLC28A3Q9HAS3 691 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 PLSCR4Q9NRQ2 329 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 ACSS1Q9NUB1 689 aaPredicted RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 OGFRQ9NZT2 677 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 SLC9A2Q9UBY0 812 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 FBXW11Q9UKB1 542 aa4.46□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF215Q9UL58 517 aaPredicted RBP4.46□□□□□ -1.7
CCDC54-201ENST00000261058 PASKQ96RG2 1323 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 BICDL2A1A5D9 508 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 GOLGA6L9A6NEM1 432 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 TCERG1O14776 1098 aaKnown RBP4.45□□□□□ -1.7
CCDC54-201ENST00000261058 ATP2A1O14983 1001 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 SERPINI2O75830 405 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 NTN1O95631 604 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 ACTN1P12814 892 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF12P17014 697 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM11P17152 192 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 PON1P27169 355 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 STX2P32856 288 aa4.45□□□□□ -1.7
CCDC54-201ENST00000261058 PIK3CAP42336 1068 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms