RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PTCHD4Q6ZW05 846 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CHSY3Q70JA7 882 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 SLC26A9Q7LBE3 791 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CUZD1Q86UP6 607 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 PCDH20Q8N6Y1 951 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 DGCR14Q96DF8 476 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 BTN2A3PQ96KV6 586 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 PANX1Q96RD7 426 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 GORASP1Q9BQQ3 440 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 HMX1Q9NP08 348 aaPredicted RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 KIAA1522Q9P206 1035 aaPredicted RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 GULP1Q9UBP9 304 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 SCAF8Q9UPN6 1271 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 FAM86C2PA6NEL3 165 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 AP3D1O14617 1153 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 SLC28A2O43868 658 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CSDE1O75534 798 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 LINC00032P0C843 101 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CDH3P22223 829 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 FCHO2Q0JRZ9 810 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 RIPK1Q13546 671 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 VGLL4Q14135 290 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 RAP1GAP2Q684P5 730 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 RBM44Q6ZP01 1051 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 HIPK1Q86Z02 1210 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 TMC8Q8IU68 726 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 DSELQ8IZU8 1212 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 TMEM199Q8N511 208 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 ZNF248Q8NDW4 579 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 EXD2Q9NVH0 621 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 ZNF446Q9NWS9 450 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 KCTD5Q9NXV2 234 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 ZNHIT2Q9UHR6 403 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 MSRAQ9UJ68 235 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 FBXL21Q9UKT6 434 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 PSMD13Q9UNM6 376 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 KCNE2Q9Y6J6 123 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 TMEM150BA6NC51 233 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 NPEPPSL1A6NEC2 478 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 FARP2O94887 1054 aaPredicted RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 SLC35G4P0C7Q5 338 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 ABL2P42684 1182 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 OMPP47874 163 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 POLR2JP52435 117 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 USP46P62068 366 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 KCNJ2P63252 427 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 FKBP1BP68106 108 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CNTN2Q02246 1040 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 HKDC1Q2TB90 917 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 CAPN13Q6MZZ7 669 aaPredicted RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 ALYREFQ86V81 257 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 RIT1Q92963 219 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 ROPN1LQ96C74 230 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 BCL2L14Q9BZR8 327 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 S100A14Q9HCY8 104 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 PTGFRNQ9P2B2 879 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 MRPS33Q9Y291 106 aaKnown RBP4.57□□□□□ -1.68
CHD9-221ENST00000615216 OR10H1Q9Y4A9 318 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 RPTORQ8N122 1335 aa4.57□□□□□ -1.68
CHD9-221ENST00000615216 NUP98P52948 1817 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 MCIDASD6RGH6 385 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 BCKDKO14874 412 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 SPTLC1O15269 473 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 OR10H3O60404 316 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 ZSCAN5DPP0CG00 497 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 RPL4P36578 427 aaKnown RBP4.56□□□□□ -1.68
CHD9-221ENST00000615216 JAM2P57087 298 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 IL17AQ16552 155 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 ZACNQ401N2 412 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 MON1AQ86VX9 555 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 DNAJB14Q8TBM8 379 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 HM13Q8TCT9 377 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 RCN3Q96D15 328 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 NDNQ99608 321 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 PDCD10Q9BUL8 212 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 CHID1Q9BWS9 393 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 C1QTNF1Q9BXJ1 281 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 SOHLH2Q9NX45 425 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 USP12O75317 370 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 KRT36O76013 467 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 GJB6O95452 261 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 CDH5P33151 784 aaPredicted RBP4.56□□□□□ -1.68
CHD9-221ENST00000615216 ADCYAP1R1P41586 468 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 CCT3P49368 545 aaKnown RBP4.56□□□□□ -1.68
CHD9-221ENST00000615216 CDK9P50750 372 aaKnown RBP4.56□□□□□ -1.68
CHD9-221ENST00000615216 DMPKQ09013 629 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 CES5AQ6NT32 575 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 MON1BQ7L1V2 547 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 RD3Q7Z3Z2 195 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 IRF2BP2Q7Z5L9 587 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 GPR180Q86V85 440 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 PEX5LQ8IYB4 626 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 TRPV1Q8NER1 839 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 SLC9A7Q96T83 725 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 CDT1Q9H211 546 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 TOR4AQ9NXH8 423 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 ATXN10Q9UBB4 475 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 ZNF222Q9UK12 451 aa4.56□□□□□ -1.68
CHD9-221ENST00000615216 TRAF6Q9Y4K3 522 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms