RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 SUFUQ9UMX1 484 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ARHGEF17Q96PE2 2063 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 A0A0U1RQS6 177 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 C9orf172C9J069 976 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 ECEL1O95672 775 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 PEX11BO96011 259 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 CEACAM5P06731 702 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 SKILP12757 684 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 CR2P20023 1033 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 POLD2P49005 469 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 HCAR3P49019 387 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 ZNF135P52742 658 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 LINC00303Q3SY05 128 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 PIM3Q86V86 326 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 BBS5Q8N3I7 341 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 RCBTB1Q8NDN9 531 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 JPH3Q8WXH2 748 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 TMEM159Q96B96 161 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 TRIM11Q96F44 468 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 CSPG4P5Q96PW8 444 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 MGME1Q9BQP7 344 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 TEX101Q9BY14 249 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 AKAP7Q9P0M2 348 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 CD84Q9UIB8 345 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
POLR2A-202ENST00000573603 HEMK1Q9Y5R4 338 aaPredicted RBP12.36□□□□□ -0.43
POLR2A-202ENST00000573603 A0A1W2PQ67 120 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 SYCE3A1L190 88 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 B4GAT1O43505 415 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 MAFKO60675 156 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 CPNE6O95741 557 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 FUCA1P04066 466 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 FGF1P05230 155 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 FAM87AP0C7U9 286 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 GZMAP12544 262 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 CCL4P13236 92 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
POLR2A-202ENST00000573603 NFKBIAP25963 317 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PCK1P35558 622 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 MMP13P45452 471 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PPM1FP49593 454 aaPredicted RBP12.35□□□□□ -0.43
POLR2A-202ENST00000573603 CYP4F2P78329 520 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 NFKB2Q00653 900 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 IQCB1Q15051 598 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 ARMC12Q5T9G4 340 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 TXNRD3NBQ6F5E7 133 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 RFLNAQ6ZTI6 216 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 Q6ZVL8 140 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 USP45Q70EL2 814 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 ZNF438Q7Z4V0 828 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 POLNQ7Z5Q5 900 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.35□□□□□ -0.43
POLR2A-202ENST00000573603 NSMCE1Q8WV22 266 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 SMIM14Q96QK8 99 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 MRPL47Q9HD33 250 aaKnown RBP12.35□□□□□ -0.43
POLR2A-202ENST00000573603 NT5MQ9NPB1 228 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PHTF1Q9UMS5 762 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PCDHB11Q9Y5F2 797 aa12.35□□□□□ -0.43
POLR2A-202ENST00000573603 PGLSO95336 258 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 MYBL1P10243 752 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 RARAP10276 462 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 ADCY8P40145 1251 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 PRKCIP41743 596 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 ACTR1BP42025 376 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 GPR1P46091 355 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 ACTR1AP61163 376 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 CTBSQ01459 385 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 KRT81Q14533 505 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 TDRD12Q587J7 1177 aaKnown RBP12.34□□□□□ -0.43
POLR2A-202ENST00000573603 MARC1Q5VT66 337 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 NKAIN2Q5VXU1 208 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 MARK2Q7KZI7 788 aaKnown RBP12.34□□□□□ -0.43
POLR2A-202ENST00000573603 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-202ENST00000573603 NAGSQ8N159 534 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 PMEPA1Q969W9 287 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 BTBD6Q96KE9 485 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 OR2M4Q96R27 311 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 NAT10Q9H0A0 1025 aaKnown RBP12.34□□□□□ -0.43
POLR2A-202ENST00000573603 CDH19Q9H159 772 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 CLMPQ9H6B4 373 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 PCDH18Q9HCL0 1135 aa12.34□□□□□ -0.43
POLR2A-202ENST00000573603 TRNAU1APQ9NX07 287 aaKnown RBP12.34□□□□□ -0.43
POLR2A-202ENST00000573603 AIPL1Q9NZN9 384 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms