RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 CAMK4Q16566 473 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 KYAT1Q16773 422 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 UPP1Q16831 310 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 FAM78AQ5JUQ0 283 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ATF7IP2Q5U623 682 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 C1orf228Q6PIY5 440 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 STXBP4Q6ZWJ1 553 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 TCEAL8Q8IYN2 117 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 LEMD2Q8NC56 503 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 GOLGA5Q8TBA6 731 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 FAM3CQ92520 227 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 MSANTD3Q96H12 275 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 NAF1Q96HR8 494 aaKnown RBP5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 CDT1Q9H211 546 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 CXCL16Q9H2A7 254 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 HSD3B7Q9H2F3 369 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 LMAN1LQ9HAT1 526 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 PLEKHA5Q9HAU0 1116 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ZNF334Q9HCZ1 680 aaPredicted RBP5.06□□□□□ -1.6
KARSP3-201ENST00000571212 AGPAT3Q9NRZ7 376 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 EXOC1Q9NV70 894 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ZNF180Q9UJW8 692 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 MAFFQ9ULX9 164 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 NDRG2Q9UN36 371 aaKnown RBP5.06□□□□□ -1.6
KARSP3-201ENST00000571212 PAXBP1Q9Y5B6 917 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 WNT6Q9Y6F9 365 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.06□□□□□ -1.6
KARSP3-201ENST00000571212 MYH11P35749 1972 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 ATG2BQ96BY7 2078 aa5.06□□□□□ -1.6
KARSP3-201ENST00000571212 NUP210Q8TEM1 1887 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 KIF26AQ9ULI4 1882 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ZNF638Q14966 1978 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 FAM208BQ5VWN6 2430 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CHD6Q8TD26 2715 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SMIM28A0A1B0GU29 152 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TTC26A0AVF1 554 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 H7C4K7 107 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 K7ENM7 598 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ZNF263O14978 683 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 OGTO15294 1046 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 PAPSS2O95340 614 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 LDHAP00338 332 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 KRT18P05783 430 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 PF4V1P10720 104 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CHRNB1P11230 501 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 KCNE1P15382 129 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 GDI1P31150 447 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 BRCC3P46736 316 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CXCL12P48061 93 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 LPAL2Q16609 132 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 DPCR1Q3MIW9 517 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ZSCAN23Q3MJ62 389 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 GLRA4Q5JXX5 417 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 RBM20Q5T481 1227 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CYP4A22Q5TCH4 519 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TPGS2Q68CL5 300 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ANKRD40Q6AI12 368 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CAVIN1Q6NZI2 390 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 VITQ6UXI7 678 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CCDC91Q7Z6B0 441 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 FAM90A1Q86YD7 464 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 MFSD6LQ8IWD5 586 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ELMOD1Q8N336 334 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 MIER2Q8N344 545 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SPEM1Q8N4L4 309 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SMARCD2Q92925 531 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TCEAL4Q96EI5 215 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 HSPBAP1Q96EW2 488 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ZBTB45Q96K62 511 aaPredicted RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 ZNF778Q96MU6 729 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 CBWD1Q9BRT8 395 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 GPR88Q9GZN0 384 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TRPV4Q9HBA0 871 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TCF7L1Q9HCS4 588 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SLC38A7Q9NVC3 462 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 SIDT1Q9NXL6 827 aaKnown RBP5.05□□□□□ -1.6
KARSP3-201ENST00000571212 TBC1D7Q9P0N9 293 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 RSPH14Q9UHP6 348 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 RWDD2AQ9UIY3 292 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 EXOC7Q9UPT5 735 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 INSL5Q9Y5Q6 135 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 PIAS3Q9Y6X2 628 aa5.05□□□□□ -1.6
KARSP3-201ENST00000571212 DENND4CQ5VZ89 1909 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 E2F8A0AVK6 867 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 WDR91A4D1P6 747 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 TISP43B9A030 160 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 I3L4J1 428 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 PODXLO00592 558 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 IKBKBO14920 756 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 CLDN3O15551 220 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 CTIFO43310 598 aaKnown RBP5.04□□□□□ -1.6
KARSP3-201ENST00000571212 EXTL3O43909 919 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 MOSPD3O75425 235 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 AKAP3O75969 853 aa5.04□□□□□ -1.6
KARSP3-201ENST00000571212 URI1O94763 535 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms