RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 DDX10Q13206 875 aaKnown RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 PLEKHO1Q53GL0 409 aaPredicted RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 OTUD1Q5VV17 481 aaPredicted RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 NADSYN1Q6IA69 706 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 Q6ZSV7 163 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 R3HCC1LQ7Z5L2 792 aaKnown RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 TBC1D26Q86UD7 250 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 TEX45Q8NA69 505 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 TEX19Q8NA77 164 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 KLHL29Q96CT2 875 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 ZC3HAV1LQ96H79 300 aaKnown RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 SF3B5Q9BWJ5 86 aaKnown RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 USP44Q9H0E7 712 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 CDT1Q9H211 546 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 PDCL3Q9H2J4 239 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 C20orf141Q9NUB4 165 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 MPP6Q9NZW5 540 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 SRPRBQ9Y5M8 271 aaKnown RBP3.8□□□□□ -1.8
HDAC2-208ENST00000520746 PPLO60437 1756 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 CAMTA1Q9Y6Y1 1673 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 TULP4Q9NRJ4 1543 aa3.8□□□□□ -1.8
HDAC2-208ENST00000520746 PPIP5K1Q6PFW1 1433 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 RGPD8O14715 1765 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 TTC21BQ7Z4L5 1316 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 KDM4EB2RXH2 506 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 KLRF2D3W0D1 207 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 LINC01565O15544 149 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 LDB2O43679 373 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 RTN3O95197 1032 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 MBD4O95243 580 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PAPSS2O95340 614 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 CD4P01730 458 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ACAA1P09110 424 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PCNAP12004 261 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 SRD5A1P18405 259 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 TNFAIP3P21580 790 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 HMGB2P26583 209 aaKnown RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 DCTDP32321 178 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ABCD1P33897 745 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 RYKP34925 604 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 DDIT3P35638 169 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 THPOP40225 353 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 RFX5P48382 616 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 AMPHP49418 695 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 CTCFP49711 727 aaPredicted RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 HDAC4P56524 1084 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 CLDN2P57739 230 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PPP2R5BQ15173 497 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PRAMEF19Q5SWL8 479 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 FNBP1LQ5T0N5 605 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 LRRC8EQ6NSJ5 796 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 CPLX2Q6PUV4 134 aaKnown RBP3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ATF7IPQ6VMQ6 1270 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 TRILQ7L0X0 811 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 MON1BQ7L1V2 547 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 DENND6AQ8IWF6 608 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 MIGA1Q8NAN2 632 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 GPT2Q8TD30 523 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ELP5Q8TE02 316 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 RFFLQ8WZ73 363 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 SAAL1Q96ER3 474 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 BBS4Q96RK4 519 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 SIN3AQ96ST3 1273 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PCDHB16Q9NRJ7 776 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 PLSCR4Q9NRQ2 329 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 SMC4Q9NTJ3 1288 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ANKRD10Q9NXR5 420 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 TAS2R10Q9NYW0 307 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 NDRG3Q9UGV2 375 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 CARD8Q9Y2G2 431 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 ATP7BP35670 1465 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 KIF26BQ2KJY2 2108 aa3.79□□□□□ -1.8
HDAC2-208ENST00000520746 USP6P35125 1406 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 POLR3AO14802 1390 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 BRD4O60885 1362 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 CCDC7Q96M83 1385 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 NRKQ7Z2Y5 1582 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 A0A1B0GVT2 93 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 HSPB2A8KAH6 182 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 LDLRAD4O15165 306 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 TNFSF14O43557 240 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 RGS14O43566 566 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 SPRY3O43610 288 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 ITM2AO43736 263 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 RGS11O94810 467 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 ZNF432O94892 652 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 TBX18O95935 607 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 LCATP04180 440 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 HEXAP06865 529 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 UBL4AP11441 157 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 GNLYP22749 145 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 EPHA8P29322 1005 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 ARL1P40616 181 aaPredicted RBP3.78□□□□□ -1.8
HDAC2-208ENST00000520746 KCNJ4P48050 445 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 RFX2P48378 723 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 CXCR3P49682 368 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 EFNA5P52803 228 aa3.78□□□□□ -1.8
HDAC2-208ENST00000520746 DSCR9P59020 149 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms