RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FBXL8Q96CD0 374 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 C3orf30Q96M34 536 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 TSPAN18Q96SJ8 248 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 IL12RB2Q99665 862 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 WDR12Q9GZL7 423 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 SPATC1LQ9H0A9 340 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 FBRSL1Q9HCM7 1045 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 UBP1Q9NZI7 540 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 COX16Q9P0S2 106 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 SCHIP1Q9P0W5 487 aaPredicted RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 NUP205Q92621 2012 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 KRBA1A5PL33 1030 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 UBXN8O00124 270 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 TNPO2O14787 897 aaKnown RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 TPST1O60507 370 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 VPS4BO75351 444 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 PRSS23O95084 383 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 SNAP29O95721 258 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 F9P00740 461 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 UGT2B4P06133 528 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 FUT4P22083 530 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 WARSP23381 471 aaKnown RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 GSK3BP49841 420 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 HERVK_113P63132 956 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 CYP2A13Q16696 494 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 FKBP9P1Q75LS8 142 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 ARMCX2Q7L311 632 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 B3GALNT2Q8NCR0 500 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 MAGEE2Q8TD90 523 aaPredicted RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 BPIFB1Q8TDL5 484 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 ZC3H15Q8WU90 426 aaKnown RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 EFHD2Q96C19 240 aaPredicted RBP17.75■□□□□ 0.43
NUP54-205ENST00000507257 BTN2A3PQ96KV6 586 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 ERVK-6Q9BXR3 956 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 FANCEQ9HB96 536 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 GLOD4Q9HC38 313 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 TMEM45AQ9NWC5 275 aa17.75■□□□□ 0.43
NUP54-205ENST00000507257 A0A1W2PP18 115 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 C16orf96A6NNT2 1141 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 H0Y858 1186 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 INPP4BO15327 924 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 HPRP00739 348 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ETFBP38117 255 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 GNA12Q03113 381 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ITGADQ13349 1161 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 SEPT6Q14141 434 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 VPS26BQ4G0F5 336 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 UNC50Q53HI1 259 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 RBM20Q5T481 1227 aaKnown RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 CLEC6AQ6EIG7 209 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 PM20D1Q6GTS8 502 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 PROSER1Q86XN7 944 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 APPL2Q8NEU8 664 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 HDAC2Q92769 488 aaKnown RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 TAMM41Q96BW9 452 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 VMP1Q96GC9 406 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 EIF2AQ9BY44 585 aaKnown RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 CXCL16Q9H2A7 254 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ALG2Q9H553 416 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ARMC7Q9H6L4 198 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 HMG20AQ9NP66 347 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 SNTG2Q9NY99 539 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 DNAJC15Q9Y5T4 150 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 EP400Q96L91 3159 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 COL4A4P53420 1690 aaPredicted RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 C1orf232A0A0U1RR37 186 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 VTNP04004 478 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 HTR1EP28566 365 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ALDH3A2P51648 485 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 PARP8Q8N3A8 854 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 ABHD11Q8NFV4 315 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 S100ZQ8WXG8 99 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 C18orf25Q96B23 403 aaPredicted RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 SH3YL1Q96HL8 342 aaPredicted RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 ALPK1Q96QP1 1244 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 SLC30A3Q99726 388 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 BEGAINQ9BUH8 593 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
NUP54-205ENST00000507257 OAS3Q9Y6K5 1087 aaKnown RBP17.74■□□□□ 0.43
NUP54-205ENST00000507257 ATP6AP2A0A1C7CYW4 349 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 AQP9O43315 295 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 ATP6AP2O75787 350 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 SUPT7LO94864 414 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 NPPAP01160 153 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 LBPP18428 481 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 CRHBPP24387 322 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 EIF2B2P49770 351 aaKnown RBP17.73■□□□□ 0.43
NUP54-205ENST00000507257 DAOAP59103 153 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 KANK2Q63ZY3 851 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 HFE2Q6ZVN8 426 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 FKBP10Q96AY3 582 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms