RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SPOPO43791 374 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 LCA5LO95447 670 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 MMP2P08253 660 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 GOLGA6DP0CG33 693 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 TNNT1P13805 278 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 ZNF30P17039 623 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 TEAD1P28347 426 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 RPL26P61254 145 aaKnown RBP18.89■□□□□ 0.61
COL5A1-203ENST00000460264 CDK3Q00526 305 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 DPTQ07507 201 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 PDK1Q15118 436 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 RAET1GQ6H3X3 334 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 NPNTQ6UXI9 565 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 RFX6Q8HWS3 928 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 CNTD1Q8N815 330 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 LPCAT1Q8NF37 534 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 MAK16Q9BXY0 300 aaKnown RBP18.89■□□□□ 0.61
COL5A1-203ENST00000460264 FRMD8Q9BZ67 464 aaPredicted RBP18.89■□□□□ 0.61
COL5A1-203ENST00000460264 PCDH9Q9HC56 1237 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 GOLGA6AQ9NYA3 693 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 RPL26L1Q9UNX3 145 aaKnown RBP18.89■□□□□ 0.61
COL5A1-203ENST00000460264 KIF26BQ2KJY2 2108 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 ZFC3H1O60293 1989 aaKnown RBP18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CASC3O15234 703 aaKnown RBP18.88■□□□□ 0.61
COL5A1-203ENST00000460264 USP12O75317 370 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 TCEA3O75764 348 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 SOD1P00441 154 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CEACAM5P06731 702 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 ZFXP17010 805 aaPredicted RBP18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CD86P42081 329 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 MAGEA1P43355 309 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 STC1P52823 247 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 DYNLT1P63172 113 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 PTSQ03393 145 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 ISXQ2M1V0 245 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 MFSD7Q6UXD7 560 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 RBM44Q6ZP01 1051 aaKnown RBP18.88■□□□□ 0.61
COL5A1-203ENST00000460264 TAF8Q7Z7C8 310 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CCL4L1Q8NHW4 92 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CCDC74AQ96AQ1 378 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 DCBLD2Q96PD2 775 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 GOLPH3Q9H4A6 298 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 CD84Q9UIB8 345 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 MOSPD1Q9UJG1 213 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 DNPEPQ9ULA0 475 aa18.88■□□□□ 0.61
COL5A1-203ENST00000460264 PPP1R12AO14974 1030 aaPredicted RBP18.87■□□□□ 0.61
COL5A1-203ENST00000460264 PSTPIP1O43586 416 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 MPOP05164 745 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 CDKN2BP42772 138 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 NOP2P46087 812 aaKnown RBP18.87■□□□□ 0.61
COL5A1-203ENST00000460264 ZNF75DP51815 510 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 SKOR1P84550 965 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 AP1B1Q10567 949 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 TAZQ16635 292 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 COL28A1Q2UY09 1125 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 ZNF765Q7L2R6 523 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 FAM46DQ8NEK8 389 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 GPR156Q8NFN8 814 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 SNIP1Q8TAD8 396 aaKnown RBP18.87■□□□□ 0.61
COL5A1-203ENST00000460264 WDR48Q8TAF3 677 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 HNRNPLLQ8WVV9 542 aaKnown RBP18.87■□□□□ 0.61
COL5A1-203ENST00000460264 SCAMP4Q969E2 229 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 AP2M1Q96CW1 435 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 LYSMD1Q96S90 227 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 CEP41Q9BYV8 373 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 RBSNQ9H1K0 784 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 ABCG8Q9H221 673 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 CARS2Q9HA77 564 aaKnown RBP18.87■□□□□ 0.61
COL5A1-203ENST00000460264 TFR2Q9UP52 801 aa18.87■□□□□ 0.61
COL5A1-203ENST00000460264 FUCA1P04066 466 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 GPR1P46091 355 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 GABREP78334 506 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 TBC1D25Q3MII6 688 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 OGFOD3Q6PK18 319 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 SFTPA2Q8IWL1 248 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 GPBAR1Q8TDU6 330 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 PTCD2Q8WV60 388 aaKnown RBP18.86■□□□□ 0.61
COL5A1-203ENST00000460264 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 SUDS3Q9H7L9 328 aaPredicted RBP18.86■□□□□ 0.61
COL5A1-203ENST00000460264 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 SLC17A4Q9Y2C5 497 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 PCDHA13Q9Y5I0 950 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 ENTPD2Q9Y5L3 495 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
COL5A1-203ENST00000460264 IGSF10Q6WRI0 2623 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 A0A0A6YYK5 440 aaPredicted RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 B4DGG1 531 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 NTN3O00634 580 aaPredicted RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 NOBOXO60393 691 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 DXOO77932 396 aaKnown RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 CLDN7O95471 211 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 ACTN2P35609 894 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 EIF2S3P41091 472 aaKnown RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 PDX1P52945 283 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SPIDRQ14159 915 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SPA17Q15506 151 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms