RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 AKR7LQ8NHP1 331 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 PIGOQ8TEQ8 1089 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TRAPPC12Q8WVT3 735 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 WFDC12Q8WWY7 111 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 NANOS1Q8WY41 292 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ING5Q8WYH8 240 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 STAMQ92783 540 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MASTLQ96GX5 879 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF764Q96H86 408 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 C5orf34Q96MH7 638 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 LGR4Q9BXB1 951 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MRPL4Q9BYD3 311 aaKnown RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ANKRD2Q9GZV1 360 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 USP29Q9HBJ7 922 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 CD209Q9NNX6 404 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 DMRT3Q9NQL9 472 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 SETD4Q9NVD3 440 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 TAS2R10Q9NYW0 307 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 MAGED2Q9UNF1 606 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 GDAQ9Y2T3 454 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ST14Q9Y5Y6 855 aa4.98□□□□□ -1.61
EPHA3-202ENST00000452448 ASTN2O75129 1339 aaPredicted RBP4.98□□□□□ -1.61
EPHA3-202ENST00000452448 hCG_1809904A0A1W2PP81 198 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1W2PPE2 198 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1W2PR64 198 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 EFCAB10A6NFE3 127 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 TCP11X1B4DZS4 312 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GTPBP1O00178 669 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 TRAF5O00463 557 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MED7O43513 233 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GPRIN2O60269 458 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 TRIM3O75382 744 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CRCPO75575 148 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MLYCDO95822 493 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 IL1BP01584 269 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 APOA1P02647 267 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CSTBP04080 98 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 INHBAP08476 426 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CNPP09543 421 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 NR2F1P10589 423 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 YBX3P16989 372 aaKnown RBP eCLIP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 IL11P20809 199 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CPN2P22792 545 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 F8A1P23610 371 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ATP5C1P36542 298 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LIG4P49917 911 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MEOX2P50222 304 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CCR4P51679 360 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PSMD4P55036 377 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ERVK-8P63133 956 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PSPHP78330 225 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SNX17Q15036 470 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PDK2Q15119 407 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DUSP7Q16829 419 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 EPC2Q52LR7 807 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ETFRF1Q6IPR1 90 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 BHLHB9Q6PI77 547 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KLHL24Q6TFL4 600 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LAYNQ6UX15 382 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KIAA0408Q6ZU52 694 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ERN2Q76MJ5 926 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GSTA5Q7RTV2 222 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 FAM122BQ7Z309 247 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GPR149Q86SP6 731 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LINC00523Q86TU6 105 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 NAGSQ8N159 534 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SFRP1Q8N474 314 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 UBL4BQ8N7F7 174 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ASCC1Q8N9N2 400 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CPEB3Q8NE35 698 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 OR5H6Q8NGV6 325 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 KCNG4Q8TDN1 519 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 RAPGEF4Q8WZA2 1011 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SNX19Q92543 992 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 HTRA1Q92743 480 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DDX17Q92841 729 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LURAP1Q96LR2 239 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 C9orf72Q96LT7 481 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 TRNT1Q96Q11 434 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CCNL2Q96S94 520 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 P2RX7Q99572 595 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SPXQ9BT56 116 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 ZYG11BQ9C0D3 744 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 LRMDAQ9H2I8 198 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 SLC6A15Q9H2J7 730 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PABPC3Q9H361 631 aaKnown RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 PCDH9Q9HC56 1237 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 MAGEE1Q9HCI5 957 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 CABP5Q9NP86 173 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 INTS13Q9NVM9 706 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 BABAM1Q9NWV8 329 aa4.97□□□□□ -1.61
EPHA3-202ENST00000452448 NKX1-2Q9UD57 310 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
EPHA3-202ENST00000452448 DHRS7Q9Y394 339 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms