RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 FASTKQ14296 549 aaKnown RBP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 TMEM132DQ14C87 1099 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ATP6AP1Q15904 470 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SLC36A3Q495N2 470 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 TSTD2Q5T7W7 516 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 NIPAL1Q6NVV3 410 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 PID1Q7Z2X4 250 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 PIWIL4Q7Z3Z4 852 aaKnown RBP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SPRED1Q7Z699 444 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ZC3HC1Q86WB0 502 aaKnown RBP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 DHFR2Q86XF0 187 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 TRIM50Q86XT4 487 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 AQP12AQ8IXF9 295 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ANKRD13AQ8IZ07 590 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 PYROXD2Q8N2H3 581 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 FSTL5Q8N475 847 aaPredicted RBP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 PDPRQ8NCN5 879 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ACVR1CQ8NER5 493 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 KCTD4Q8WVF5 259 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 PPP1R36Q96LQ0 422 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 COG8Q96MW5 612 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 TEPSINQ96N21 525 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 GPR78Q96P69 363 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 APBA2Q99767 749 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SLC25A23Q9BV35 468 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 TEX13BQ9BXU2 312 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 NFKBIZQ9BYH8 718 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 UPF3AQ9H1J1 476 aaKnown RBP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ADAMTS10Q9H324 1103 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 MEAF6Q9HAF1 191 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SPAG4Q9NPE6 437 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SMOXQ9NWM0 555 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SLC39A10Q9ULF5 831 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 ZNF232Q9UNY5 417 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SNX9Q9Y5X1 595 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 SLC30A1Q9Y6M5 507 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 DMDP11532 3685 aa7.53□□□□□ -1.2
C11orf54-202ENST00000354421 CCDC162PA2VCL2 907 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ZNF839A8K0R7 811 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 INO80B-WBP1J3KQ70 363 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 AP3B1O00203 1094 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 GIPC1O14908 333 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 TIPRLO75663 272 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SULT1C4O75897 302 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ZBTB11O95625 1053 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 PTPN3P26045 913 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ACADSBP45954 432 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 IREB2P48200 963 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 BACE1P56817 501 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 MPP1Q00013 466 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 POU5F1BQ06416 359 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 MERTKQ12866 999 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 USP10Q14694 798 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SMAD1Q15797 465 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 DGKDQ16760 1214 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 TMEM132AQ24JP5 1023 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SOWAHAQ2M3V2 549 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SPATS1Q496A3 300 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 AGKQ53H12 422 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 GRAMD4Q6IC98 578 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ANKRD26P1Q6NSI1 321 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 GADL1Q6ZQY3 521 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 FASTKD5Q7L8L6 764 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 PLPPR4Q7Z2D5 763 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ANKRD23Q86SG2 305 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ERO1BQ86YB8 467 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 KLHDC8BQ8IXV7 354 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 CENPLQ8N0S6 344 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 CENPSQ8N2Z9 138 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ZNF786Q8N393 782 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 LRRC71Q8N4P6 559 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 AFAP1L2Q8N4X5 818 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 C12orf29Q8N999 325 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SPPL2BQ8TCT7 592 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 RNF139Q8WU17 664 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 TRUB1Q8WWH5 349 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ROPN1LQ96C74 230 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 MOCOSQ96EN8 888 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 FEM1CQ96JP0 617 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SLC45A3Q96JT2 553 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 NEURL2Q9BR09 285 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 C9orf16Q9BUW7 83 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 ADI1Q9BV57 179 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 RHOBTB2Q9BYZ6 727 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 TRIM15Q9C019 465 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SNX25Q9H3E2 840 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 IARS2Q9NSE4 1012 aaKnown RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 PRMT7Q9NVM4 692 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 SEPT10Q9P0V9 454 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.52□□□□□ -1.2
C11orf54-202ENST00000354421 MSRAQ9UJ68 235 aa7.52□□□□□ -1.2
C11orf54-202ENST00000354421 CDC14AQ9UNH5 594 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms