RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PRSS38A1L453 326 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 LRRD1A4D1F6 860 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 CACNB4O00305 520 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 USP12O75317 370 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 LCA5LO95447 670 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 JCHAINP01591 159 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 CYP2A6P11509 494 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 MYCLP1P12525 358 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 IFI35P80217 286 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 SKOR1P84550 965 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 DPTQ07507 201 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 ITKQ08881 620 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 TBC1D25Q3MII6 688 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 TIGD7Q6NT04 549 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 MFSD7Q6UXD7 560 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 C17orf82Q86X59 251 aaPredicted RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 VSIG1Q86XK7 387 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 MAP7D3Q8IWC1 876 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 CCDC13Q8IYE1 715 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 SDR16C5Q8N3Y7 309 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 SCAMP4Q969E2 229 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 TADA1Q96BN2 335 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 HIC2Q96JB3 615 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 DEPDC7Q96QD5 511 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 CYP4F12Q9HCS2 524 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 SPATS2LQ9NUQ6 558 aaKnown RBP17.02■□□□□ 0.32
BRCC3-202ENST00000340647 AMACRQ9UHK6 382 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 LCMT1Q9UIC8 334 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 INTUQ9ULD6 942 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 GPR34Q9UPC5 381 aa17.02■□□□□ 0.32
BRCC3-202ENST00000340647 DXOO77932 396 aaKnown RBP17.01■□□□□ 0.31
BRCC3-202ENST00000340647 COMTP21964 271 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 TEAD1P28347 426 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 NOP2P46087 812 aaKnown RBP17.01■□□□□ 0.31
BRCC3-202ENST00000340647 STC1P52823 247 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 QPCTQ16769 361 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 LRRC38Q5VT99 294 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 B3GNT8Q7Z7M8 397 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 CNGA4Q8IV77 575 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 RHOT2Q8IXI1 618 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 GPBAR1Q8TDU6 330 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 CCDC74AQ96AQ1 378 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 RNF25Q96BH1 459 aaPredicted RBP17.01■□□□□ 0.31
BRCC3-202ENST00000340647 SCARF2Q96GP6 870 aaPredicted RBP17.01■□□□□ 0.31
BRCC3-202ENST00000340647 DCBLD2Q96PD2 775 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 TRIB3Q96RU7 358 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 LYSMD1Q96S90 227 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 CEP41Q9BYV8 373 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 BRD8Q9H0E9 1235 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 ABCG4Q9H172 646 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
BRCC3-202ENST00000340647 SLC17A4Q9Y2C5 497 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 PLEKHM1Q9Y4G2 1056 aa17.01■□□□□ 0.31
BRCC3-202ENST00000340647 RCCD1A6NED2 376 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 CAPN8A6NHC0 703 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 CLDN7O95471 211 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 MX2P20592 715 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 CDKN2BP42772 138 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 LSSP48449 732 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 MARCKSL1P49006 195 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 HADHBP55084 474 aaKnown RBP17■□□□□ 0.31
BRCC3-202ENST00000340647 GABREP78334 506 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 CCL7P80098 99 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 HLTFQ14527 1009 aaKnown RBP eCLIP17■□□□□ 0.31
BRCC3-202ENST00000340647 USP45Q70EL2 814 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 TMPRSS9Q7Z410 1059 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 NLRP8Q86W28 1048 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 GKN2Q86XP6 184 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 PAF1Q8N7H5 531 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 ATL2Q8NHH9 583 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 FGF11Q92914 225 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 NAT6Q93015 286 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 COX14Q96I36 57 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 RBSNQ9H1K0 784 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 PCDH9Q9HC56 1237 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 SAE1Q9UBE0 346 aaPredicted RBP17■□□□□ 0.31
BRCC3-202ENST00000340647 SUFUQ9UMX1 484 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 SATB2Q9UPW6 733 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 HEY1Q9Y5J3 304 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 KALRNO60229 2985 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 ATMQ13315 3056 aa17■□□□□ 0.31
BRCC3-202ENST00000340647 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
BRCC3-202ENST00000340647 TCEA3O75764 348 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 FGF1P05230 155 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 KRT10P13645 584 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 CES1P23141 567 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 AK4P27144 223 aaPredicted RBP16.99■□□□□ 0.31
BRCC3-202ENST00000340647 CD86P42081 329 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 RPIAP49247 311 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 ARHGEF7Q14155 803 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 LLGL1Q15334 1064 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 RBM44Q6ZP01 1051 aaKnown RBP16.99■□□□□ 0.31
BRCC3-202ENST00000340647 TAF8Q7Z7C8 310 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 TRIM74Q86UV6 250 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 GAS2L3Q86XJ1 694 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 CCNYQ8ND76 341 aa16.99■□□□□ 0.31
BRCC3-202ENST00000340647 FAM46DQ8NEK8 389 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms