RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Dusp16Q6PCP3 660 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Tspan8Q8R3G9 235 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Akr1c20Q8VC77 323 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Barhl2Q8VIB5 384 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 NlnQ91YP2 704 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Tbc1d21Q9D9D3 336 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Arih2Q9Z1K6 492 aa15.1■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Fam155bA2BDP1 471 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gm7073E9QAS1 335 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 PenkP22005 268 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Aqp4P55088 323 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Eml1Q05BC3 814 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Dnajb14Q149L6 379 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gpatch4Q3TFK5 415 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 JrkQ60976 557 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Dna2Q6ZQJ5 1062 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ints7Q7TQK1 966 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Olfr1198Q7TR12 308 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 SgtaQ8BJU0 315 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Cgrrf1Q8BMJ7 332 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 KelQ9EQF2 713 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gm13276A0A087WR18 182 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gm45233A0A0N4SVE0 221 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Rpl9-ps6A0A140T8T4 192 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gm45713A0A1B0GS68 446 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Skint7A7XV04 395 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Zfp963D3Z2T8 383 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Nat1P50294 290 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Rpl9P51410 192 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Usp17laQ61068 526 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Samd4bQ80XS6 687 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Camk1dQ8BW96 385 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Abi3Q8BYZ1 367 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Trim31Q8R0K2 507 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 RhoqQ8R527 205 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ing3Q8VEK6 421 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Marc1Q9CW42 340 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ccdc77Q9CZH8 489 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 GmprQ9DCZ1 345 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Map2k5Q9WVS7 448 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ms4a4aA0A087WRT7 236 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 SmgcF6VRN1 385 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 P01740 135 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Psmd7P26516 321 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Mbl1P39039 239 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 CratP47934 626 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Fbp2P70695 339 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Colec11Q3SXB8 272 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Fam71bQ5STT6 665 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Atg16l2Q6KAU8 623 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 SntnQ8C9X1 147 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Gspt1Q8R050 636 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Map3k21Q8VDG6 1002 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 HnrnpabQ99020 285 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Klhl28Q9CR40 571 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 CenpsQ9D084 142 aa15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Cdkn2aipnlQ9D211 116 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Mfsd10Q9D2V8 456 aaKnown RBP15.09■□□□□ 0.01
Scaf4-201ENSMUST00000039280 PiggD3Z3Y1 983 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ctps1P70698 591 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Nr6a1Q64249 495 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Bend6Q6PFX2 281 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ppm1lQ8BHN0 360 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Spon2Q8BMS2 330 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Ago1Q8CJG1 857 aaKnown RBP15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Smyd2Q8R5A0 433 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 MiosQ8VE19 875 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Slc29a1Q9JIM1 460 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Smpd3Q9JJY3 655 aa15.08■□□□□ 0.01
Scaf4-201ENSMUST00000039280 Pramef20B1ARV6 477 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 AladP10518 330 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Bop1P97452 732 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Magee2Q52KG3 523 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Stmnd1Q6P3A1 279 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Tas2r131Q7M708 310 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Cdhr5Q8VHF2 831 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 OoepQ9CWE6 164 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Hnrnpa0Q9CX86 305 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Leng1Q9DB98 261 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Nt5cQ9JM14 200 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 FanceB8JJD6 213 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Dpy19l2P0CW70 773 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Mpp1P70290 466 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Atp5jP97450 108 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Prickle1Q3U5C7 832 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Eif2s1Q6ZWX6 315 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Dhx33Q80VY9 698 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Mrps35Q8BJZ4 320 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Thoc5Q8BKT7 683 aaKnown RBP15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Snx16Q8C080 344 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 IrgcQ8C262 412 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Mab21L3Q8CI17 429 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 PvrQ8K094 408 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Arl2Q9D0J4 184 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Smg9Q9DB90 520 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Wdr12Q9JJA4 423 aa15.08■□□□□ 0
Scaf4-201ENSMUST00000039280 Trbv4A0A075B5I2 113 aa15.07■□□□□ 0
Scaf4-201ENSMUST00000039280 Ssxb8B1AY40 170 aa15.07■□□□□ 0
Scaf4-201ENSMUST00000039280 9230113P08RikD3YWX3 137 aa15.07■□□□□ 0
Scaf4-201ENSMUST00000039280 Tpst1O70281 370 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 107.5 ms