Protein–RNA interactions for Protein: Q8BJZ4

Mrps35, 28S ribosomal protein S35, mitochondrial, mousemouse

Known RBP Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps35Q8BJZ4 Gm25239-201ENSMUST00000174915 86 ntBASIC34.99■■■■□ 3.19
Mrps35Q8BJZ4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Mrps35Q8BJZ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Mrps35Q8BJZ4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Mrps35Q8BJZ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Mrps35Q8BJZ4 Gm15042-201ENSMUST00000120212 883 ntBASIC30.92■■■□□ 2.54
Mrps35Q8BJZ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Mrps35Q8BJZ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Mrps35Q8BJZ4 Gm15045-201ENSMUST00000117359 883 ntBASIC30.3■■■□□ 2.44
Mrps35Q8BJZ4 Gm24109-201ENSMUST00000175489 103 ntBASIC30.16■■■□□ 2.42
Mrps35Q8BJZ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Mrps35Q8BJZ4 Psd-208ENSMUST00000224556 2034 ntBASIC29.99■■■□□ 2.39
Mrps35Q8BJZ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Mrps35Q8BJZ4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Mrps35Q8BJZ4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Mrps35Q8BJZ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.41■■■□□ 2.3
Mrps35Q8BJZ4 Gm23366-201ENSMUST00000175022 89 ntBASIC29.28■■■□□ 2.28
Mrps35Q8BJZ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Mrps35Q8BJZ4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Mrps35Q8BJZ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Mrps35Q8BJZ4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Mrps35Q8BJZ4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Mrps35Q8BJZ4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Mrps35Q8BJZ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Mrps35Q8BJZ4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Mrps35Q8BJZ4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Mrps35Q8BJZ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Mrps35Q8BJZ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.67■■■□□ 2.18
Mrps35Q8BJZ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Mrps35Q8BJZ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Mrps35Q8BJZ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Mrps35Q8BJZ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Mrps35Q8BJZ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Mrps35Q8BJZ4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Mrps35Q8BJZ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Mrps35Q8BJZ4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.38■■■□□ 2.13
Mrps35Q8BJZ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.31■■■□□ 2.12
Mrps35Q8BJZ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Mrps35Q8BJZ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Mrps35Q8BJZ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Mrps35Q8BJZ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Mrps35Q8BJZ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.89■■■□□ 2.06
Mrps35Q8BJZ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Mrps35Q8BJZ4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Mrps35Q8BJZ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.79■■■□□ 2.04
Mrps35Q8BJZ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Mrps35Q8BJZ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Mrps35Q8BJZ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Mrps35Q8BJZ4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Mrps35Q8BJZ4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Mrps35Q8BJZ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mrps35Q8BJZ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.53■■■□□ 2
Mrps35Q8BJZ4 Gm25238-201ENSMUST00000174914 89 ntBASIC27.5■■□□□ 1.99
Mrps35Q8BJZ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Mrps35Q8BJZ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.44■■□□□ 1.98
Mrps35Q8BJZ4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Mrps35Q8BJZ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Mrps35Q8BJZ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mrps35Q8BJZ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.42■■□□□ 1.98
Mrps35Q8BJZ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Mrps35Q8BJZ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mrps35Q8BJZ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.36■■□□□ 1.97
Mrps35Q8BJZ4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mrps35Q8BJZ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mrps35Q8BJZ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Mrps35Q8BJZ4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.16■■□□□ 1.94
Mrps35Q8BJZ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Mrps35Q8BJZ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.14■■□□□ 1.93
Mrps35Q8BJZ4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Mrps35Q8BJZ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Mrps35Q8BJZ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.07■■□□□ 1.92
Mrps35Q8BJZ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.03■■□□□ 1.92
Mrps35Q8BJZ4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Mrps35Q8BJZ4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
Mrps35Q8BJZ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
Mrps35Q8BJZ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Mrps35Q8BJZ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Mrps35Q8BJZ4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Mrps35Q8BJZ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.91■■□□□ 1.9
Mrps35Q8BJZ4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Mrps35Q8BJZ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Mrps35Q8BJZ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Mrps35Q8BJZ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Mrps35Q8BJZ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Mrps35Q8BJZ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
Mrps35Q8BJZ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.71■■□□□ 1.87
Mrps35Q8BJZ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.71■■□□□ 1.87
Mrps35Q8BJZ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Mrps35Q8BJZ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Mrps35Q8BJZ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Mrps35Q8BJZ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.53■■□□□ 1.84
Mrps35Q8BJZ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Mrps35Q8BJZ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Mrps35Q8BJZ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Mrps35Q8BJZ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Mrps35Q8BJZ4 Rab21-202ENSMUST00000218831 843 ntBASIC26.44■■□□□ 1.82
Mrps35Q8BJZ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Mrps35Q8BJZ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Mrps35Q8BJZ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Mrps35Q8BJZ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms