Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Gm25239-201ENSMUST00000174915 86 ntBASIC35.83■■■■□ 3.33
Trim31Q8R0K2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Trim31Q8R0K2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Trim31Q8R0K2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Trim31Q8R0K2 Gm15042-201ENSMUST00000120212 883 ntBASIC31.55■■■□□ 2.64
Trim31Q8R0K2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim31Q8R0K2 Gm24109-201ENSMUST00000175489 103 ntBASIC30.93■■■□□ 2.54
Trim31Q8R0K2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
Trim31Q8R0K2 Gm15045-201ENSMUST00000117359 883 ntBASIC30.86■■■□□ 2.53
Trim31Q8R0K2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Trim31Q8R0K2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Trim31Q8R0K2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim31Q8R0K2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Trim31Q8R0K2 Gm23366-201ENSMUST00000175022 89 ntBASIC29.98■■■□□ 2.39
Trim31Q8R0K2 Psd-208ENSMUST00000224556 2034 ntBASIC29.96■■■□□ 2.39
Trim31Q8R0K2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Trim31Q8R0K2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Trim31Q8R0K2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Trim31Q8R0K2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.6■■■□□ 2.33
Trim31Q8R0K2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trim31Q8R0K2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Trim31Q8R0K2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trim31Q8R0K2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Trim31Q8R0K2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Trim31Q8R0K2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Trim31Q8R0K2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Trim31Q8R0K2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
Trim31Q8R0K2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Trim31Q8R0K2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.93■■■□□ 2.22
Trim31Q8R0K2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.92■■■□□ 2.22
Trim31Q8R0K2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim31Q8R0K2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Trim31Q8R0K2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Trim31Q8R0K2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Trim31Q8R0K2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.63■■■□□ 2.17
Trim31Q8R0K2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.49■■■□□ 2.15
Trim31Q8R0K2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.14
Trim31Q8R0K2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trim31Q8R0K2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim31Q8R0K2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim31Q8R0K2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim31Q8R0K2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim31Q8R0K2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim31Q8R0K2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.19■■■□□ 2.1
Trim31Q8R0K2 Gm25238-201ENSMUST00000174914 89 ntBASIC28.19■■■□□ 2.1
Trim31Q8R0K2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim31Q8R0K2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.99■■■□□ 2.07
Trim31Q8R0K2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trim31Q8R0K2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Trim31Q8R0K2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trim31Q8R0K2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trim31Q8R0K2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trim31Q8R0K2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trim31Q8R0K2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim31Q8R0K2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
Trim31Q8R0K2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.7■■■□□ 2.02
Trim31Q8R0K2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.69■■■□□ 2.02
Trim31Q8R0K2 Gm27325-201ENSMUST00000175467 74 ntBASIC27.67■■■□□ 2.02
Trim31Q8R0K2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Trim31Q8R0K2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.53■■■□□ 2
Trim31Q8R0K2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Trim31Q8R0K2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.42■■□□□ 1.98
Trim31Q8R0K2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.4■■□□□ 1.98
Trim31Q8R0K2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim31Q8R0K2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim31Q8R0K2 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.37■■□□□ 1.97
Trim31Q8R0K2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.33■■□□□ 1.97
Trim31Q8R0K2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trim31Q8R0K2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
Trim31Q8R0K2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim31Q8R0K2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim31Q8R0K2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Trim31Q8R0K2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim31Q8R0K2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim31Q8R0K2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim31Q8R0K2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trim31Q8R0K2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Trim31Q8R0K2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.13■■□□□ 1.93
Trim31Q8R0K2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim31Q8R0K2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim31Q8R0K2 Rab21-202ENSMUST00000218831 843 ntBASIC27.05■■□□□ 1.92
Trim31Q8R0K2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim31Q8R0K2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim31Q8R0K2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Trim31Q8R0K2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27■■□□□ 1.91
Trim31Q8R0K2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.95■■□□□ 1.91
Trim31Q8R0K2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim31Q8R0K2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.94■■□□□ 1.9
Trim31Q8R0K2 Gm25262-201ENSMUST00000174934 133 ntBASIC26.93■■□□□ 1.9
Trim31Q8R0K2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.93■■□□□ 1.9
Trim31Q8R0K2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim31Q8R0K2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim31Q8R0K2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Trim31Q8R0K2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim31Q8R0K2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Trim31Q8R0K2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim31Q8R0K2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim31Q8R0K2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim31Q8R0K2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.63■■□□□ 1.85
Trim31Q8R0K2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms