Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Gm25239-201ENSMUST00000174915 86 ntBASIC36.77■■■■□ 3.48
Pramef20B1ARV6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Pramef20B1ARV6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Pramef20B1ARV6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Pramef20B1ARV6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.06■■■□□ 2.72
Pramef20B1ARV6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.88■■■□□ 2.69
Pramef20B1ARV6 Gm15045-201ENSMUST00000117359 883 ntBASIC31.29■■■□□ 2.6
Pramef20B1ARV6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pramef20B1ARV6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Pramef20B1ARV6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pramef20B1ARV6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pramef20B1ARV6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Pramef20B1ARV6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.72■■■□□ 2.51
Pramef20B1ARV6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pramef20B1ARV6 Psd-208ENSMUST00000224556 2034 ntBASIC30.32■■■□□ 2.44
Pramef20B1ARV6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pramef20B1ARV6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pramef20B1ARV6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pramef20B1ARV6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.77■■■□□ 2.36
Pramef20B1ARV6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Pramef20B1ARV6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pramef20B1ARV6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.55■■■□□ 2.32
Pramef20B1ARV6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
Pramef20B1ARV6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pramef20B1ARV6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pramef20B1ARV6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.37■■■□□ 2.29
Pramef20B1ARV6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pramef20B1ARV6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pramef20B1ARV6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pramef20B1ARV6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pramef20B1ARV6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pramef20B1ARV6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pramef20B1ARV6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.08■■■□□ 2.25
Pramef20B1ARV6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pramef20B1ARV6 Gm25238-201ENSMUST00000174914 89 ntBASIC29.03■■■□□ 2.24
Pramef20B1ARV6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pramef20B1ARV6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pramef20B1ARV6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pramef20B1ARV6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pramef20B1ARV6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pramef20B1ARV6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.77■■■□□ 2.2
Pramef20B1ARV6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pramef20B1ARV6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
Pramef20B1ARV6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pramef20B1ARV6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pramef20B1ARV6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pramef20B1ARV6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pramef20B1ARV6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.29■■■□□ 2.12
Pramef20B1ARV6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pramef20B1ARV6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.27■■■□□ 2.12
Pramef20B1ARV6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pramef20B1ARV6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.16■■■□□ 2.1
Pramef20B1ARV6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Pramef20B1ARV6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Pramef20B1ARV6 Gm27325-201ENSMUST00000175467 74 ntBASIC28.06■■■□□ 2.08
Pramef20B1ARV6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pramef20B1ARV6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.96■■■□□ 2.07
Pramef20B1ARV6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pramef20B1ARV6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pramef20B1ARV6 Gm25262-201ENSMUST00000174934 133 ntBASIC27.9■■■□□ 2.06
Pramef20B1ARV6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Pramef20B1ARV6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pramef20B1ARV6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.77■■■□□ 2.04
Pramef20B1ARV6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.68■■■□□ 2.02
Pramef20B1ARV6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pramef20B1ARV6 Rab21-202ENSMUST00000218831 843 ntBASIC27.64■■■□□ 2.02
Pramef20B1ARV6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pramef20B1ARV6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.58■■■□□ 2.01
Pramef20B1ARV6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.56■■■□□ 2
Pramef20B1ARV6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pramef20B1ARV6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.48■■□□□ 1.99
Pramef20B1ARV6 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.45■■□□□ 1.99
Pramef20B1ARV6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pramef20B1ARV6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Pramef20B1ARV6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pramef20B1ARV6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.38■■□□□ 1.97
Pramef20B1ARV6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.36■■□□□ 1.97
Pramef20B1ARV6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pramef20B1ARV6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pramef20B1ARV6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Pramef20B1ARV6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pramef20B1ARV6 Gm26115-201ENSMUST00000175605 87 ntBASIC27.24■■□□□ 1.95
Pramef20B1ARV6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Pramef20B1ARV6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
Pramef20B1ARV6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.21■■□□□ 1.95
Pramef20B1ARV6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.19■■□□□ 1.94
Pramef20B1ARV6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pramef20B1ARV6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pramef20B1ARV6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pramef20B1ARV6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pramef20B1ARV6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pramef20B1ARV6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Pramef20B1ARV6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pramef20B1ARV6 Gm8109-201ENSMUST00000194076 746 ntBASIC27.07■■□□□ 1.92
Pramef20B1ARV6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pramef20B1ARV6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Pramef20B1ARV6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pramef20B1ARV6 Gm42596-201ENSMUST00000196305 1958 ntBASIC27■■□□□ 1.91
Pramef20B1ARV6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
Pramef20B1ARV6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms