RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 LACRTQ9GZZ8 138 aa22.34■■□□□ 1.17
GTF2F1-204ENST00000594965 LUC7LQ9NQ29 371 aaKnown RBP22.34■■□□□ 1.17
GTF2F1-204ENST00000594965 SAE1Q9UBE0 346 aaPredicted RBP22.34■■□□□ 1.17
GTF2F1-204ENST00000594965 KMT2BQ9UMN6 2715 aaPredicted RBP22.34■■□□□ 1.17
GTF2F1-204ENST00000594965 ASXL3Q9C0F0 2248 aa22.34■■□□□ 1.17
GTF2F1-204ENST00000594965 WDFY3Q8IZQ1 3526 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 TMEM8BA6NDV4 472 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 TMEM202A6NGA9 273 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 TPP1O14773 563 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 CST8O60676 142 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 HOXC4P09017 264 aaPredicted RBP22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 PECAM1P16284 738 aaPredicted RBP22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 NFKBIAP25963 317 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 HTR1BP28222 390 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 SRP54P61011 504 aaKnown RBP22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 LRRC66Q68CR7 880 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 ZCCHC8Q6NZY4 707 aaKnown RBP22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 CRTC1Q6UUV9 634 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 Q6ZVL8 140 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 USP45Q70EL2 814 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 BOCQ9BWV1 1114 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 HAUS2Q9NVX0 235 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 ZMIZ1Q9ULJ6 1067 aa22.33■■□□□ 1.17
GTF2F1-204ENST00000594965 hCG_1818297A0A087WSY0 165 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 BTNL10A8MVZ5 291 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 LMO7DNF2Z398 122 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 PPP1R12AO14974 1030 aaPredicted RBP22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 YY2O15391 372 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 CDC25BP30305 580 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 CD86P42081 329 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 BLKP51451 505 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 INSM1Q01101 510 aaPredicted RBP22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 PTSQ03393 145 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 ARHGEF7Q14155 803 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 HES3Q5TGS1 186 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 KAZNQ674X7 775 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 RD3Q7Z3Z2 195 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 DAAM2Q86T65 1068 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 RCOR2Q8IZ40 523 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 OR1E3Q8WZA6 343 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 PDXPQ96GD0 296 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 BAG1Q99933 345 aaPredicted RBP22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 PCDH9Q9HC56 1237 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 FGF22Q9HCT0 170 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 KLQ9UEF7 1012 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 RP1P56715 2156 aa22.32■■□□□ 1.16
GTF2F1-204ENST00000594965 USP24Q9UPU5 2620 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 CACNB4O00305 520 aaPredicted RBP22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 PJA2O43164 708 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 ZRANB2O95218 330 aaKnown RBP eCLIP22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 RASGRP1O95267 797 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 NR2C2P49116 596 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 TFDP2Q14188 446 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 PRKD1Q15139 912 aaPredicted RBP22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 TFDP3Q5H9I0 405 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 NDUFAF2Q8N183 169 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 LPCAT1Q8NF37 534 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 ZCCHC14Q8WYQ9 949 aaKnown RBP22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 BRD8Q9H0E9 1235 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 USP29Q9HBJ7 922 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 MRPL40Q9NQ50 206 aaKnown RBP22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 KCTD5Q9NXV2 234 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 DGKBQ9Y6T7 804 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 KNTC1P50748 2209 aa22.31■■□□□ 1.16
GTF2F1-204ENST00000594965 CAPN8A6NHC0 703 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 TAF4O00268 1085 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 TGM2P21980 687 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 PTPN3P26045 913 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 VAV2P52735 878 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 EPHB1P54762 984 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 RPL26P61254 145 aaKnown RBP22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 E2F1Q01094 437 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 TCEA2Q15560 299 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 CDKN3Q16667 212 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 C6orf132Q5T0Z8 1188 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 FSTL5Q8N475 847 aaPredicted RBP22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 SPC24Q8NBT2 197 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 OR56A4Q8NGH8 313 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 ATL2Q8NHH9 583 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 EXD1Q8NHP7 514 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 TADA1Q96BN2 335 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 IMP4Q96G21 291 aaKnown RBP22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 AGAP3Q96P47 875 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 LYSMD1Q96S90 227 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 TEX101Q9BY14 249 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 WDR26Q9H7D7 661 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 SEPT10Q9P0V9 454 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 IMPACTQ9P2X3 320 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 RPL26L1Q9UNX3 145 aaKnown RBP22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 SCN8AQ9UQD0 1980 aa22.3■■□□□ 1.16
GTF2F1-204ENST00000594965 ARHGEF17Q96PE2 2063 aaPredicted RBP22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 ZFC3H1O60293 1989 aaKnown RBP22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 A0A0U1RQJ8 604 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 TRABD2BA6NFA1 517 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 TNFRSF10CO14798 259 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 IPO7O95373 1038 aaKnown RBP22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 CLDN7O95471 211 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 SOD1P00441 154 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 TNFP01375 233 aa22.29■■□□□ 1.16
GTF2F1-204ENST00000594965 GP1BAP07359 652 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms