RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
POLR2A-202ENST00000573603 OGFOD3Q6PK18 319 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 TMPRSS9Q7Z410 1059 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 VASH2Q86V25 355 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 HEATR4Q86WZ0 1026 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 ZFAND4Q86XD8 727 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 KIAA1524Q8TCG1 905 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 COQ10AQ96MF6 247 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 PSKH2Q96QS6 385 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 SEMA6CQ9H3T2 930 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 ZWILCHQ9H900 591 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 RDH14Q9HBH5 336 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
POLR2A-202ENST00000573603 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 COL6A6A6NMZ7 2263 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 LRRC10BA6NIK2 292 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 H3BRJ5 948 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 NUDT21O43809 227 aaKnown RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SLC28A2O43868 658 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 FTLP02792 175 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 AK4P27144 223 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 VIPR1P32241 457 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 TRIM23P36406 574 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ETV3P41162 512 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 GNPDA1P46926 289 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 MAXP61244 160 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ZFP36L1Q07352 338 aaKnown RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 NSUN2Q08J23 767 aaKnown RBP eCLIP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 TRAF2Q12933 501 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 NFATC3Q12968 1075 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 PTPRRQ15256 657 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 DOK6Q6PKX4 331 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SLC30A9Q6PML9 568 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 PRICKLE2Q7Z3G6 844 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 HSD11B1LQ7Z5J1 315 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SLITRK4Q8IW52 837 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 PGBD5Q8N414 524 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ZDHHC1Q8WTX9 485 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 PTCD2Q8WV60 388 aaKnown RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 HSPH1Q92598 858 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 USP7Q93009 1102 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SGF29Q96ES7 293 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 CMKLR1Q99788 373 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 BPIFA3Q9BQP9 254 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 PHPT1Q9NRX4 125 aaPredicted RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ETNK2Q9NVF9 386 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 ACSL6Q9UKU0 697 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 MYO6Q9UM54 1294 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 UNC13CQ8NB66 2214 aa12.38□□□□□ -0.43
POLR2A-202ENST00000573603 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 SOCS5O75159 536 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 CYP2A6P11509 494 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 CCNB1P14635 433 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 TCF4P15884 667 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 PNLIPP16233 465 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 CTPS1P17812 591 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 LHCGRP22888 699 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 AMPD1P23109 780 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 IL1R2P27930 398 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ALDH4A1P30038 563 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ARL4AP40617 200 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 OR1D5P58170 312 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 CDK3Q00526 305 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ILF3Q12906 894 aaKnown RBP eCLIP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 BIRC2Q13490 618 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 C16orf72Q14CZ0 275 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 MANEAQ5SRI9 462 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 RAET1GQ6H3X3 334 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 PSTKQ8IV42 348 aaKnown RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ATPAF2Q8N5M1 289 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 LZTR1Q8N653 840 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 PATE1Q8WXA2 126 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 EXTL1Q92935 676 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 DTD2Q96FN9 168 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ZNF599Q96NL3 588 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 NUDT22Q9BRQ3 303 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 ARHGAP9Q9BRR9 750 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 GSDMCQ9BYG8 508 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 FRMD8Q9BZ67 464 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 NOD2Q9HC29 1040 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
POLR2A-202ENST00000573603 SEPT10Q9P0V9 454 aa12.37□□□□□ -0.43
POLR2A-202ENST00000573603 TAAR2Q9P1P5 351 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms