RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 GALNT1Q10472 559 aaPredicted RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 NFYCQ13952 458 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 CDSNQ15517 529 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 USP39Q53GS9 565 aaKnown RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 ZNF783Q6ZMS7 281 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 SPATA2LQ8IUW3 424 aaPredicted RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 ALLCQ8N6M5 410 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 MDGA1Q8NFP4 955 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 RASSF8Q8NHQ8 419 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 RLN3Q8WXF3 142 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 POMGNT1Q8WZA1 660 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 RAD54LQ92698 747 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 NMD3Q96D46 503 aaKnown RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 C18orf8Q96DM3 657 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 SAAL1Q96ER3 474 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 CALML4Q96GE6 196 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 UBXN10Q96LJ8 280 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 ZNF560Q96MR9 790 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 HEPHQ9BQS7 1158 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 ACBD6Q9BR61 282 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 FAM213AQ9BRX8 229 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 TMEM120AQ9BXJ8 343 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 STK33Q9BYT3 514 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 TRIM54Q9BYV2 358 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 MAGEH1Q9H213 219 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 TMEM206Q9H813 350 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 UXTQ9UBK9 157 aaPredicted RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 TRPS1Q9UHF7 1281 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 MAN2B2Q9Y2E5 1009 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 TSC22D4Q9Y3Q8 395 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 STYXL1Q9Y6J8 313 aa5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 ATXN2Q99700 1313 aaKnown RBP5.7□□□□□ -1.5
HNRNPC-233ENST00000557768 SHROOM3Q8TF72 1996 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ANKRD11Q6UB99 2663 aaPredicted RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 DMXL2Q8TDJ6 3036 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 GOLGA8IPA6NC78 632 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 GOLGA8JA6NMD2 632 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 H3BQV1 296 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SGK1O00141 431 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 LEFTY2O00292 366 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 BTN3A1O00481 513 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 THAP12O43422 761 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ALDH1A2O94788 518 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 KLF8O95600 359 aaPredicted RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 NFATC1O95644 943 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 CD1AP06126 327 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 KRT19P08727 400 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ENGP17813 658 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ADSSP30520 456 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 PTPN7P35236 360 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 PNPLA4P41247 253 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 PTGER3P43115 390 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ITGA8P53708 1063 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 CTXN1P60606 82 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 PSMC1P62191 440 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 MYL7Q01449 175 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 HGFACQ04756 655 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 KDSRQ06136 332 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 KCNB1Q14721 858 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ACAP1Q15027 740 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 POSTNQ15063 836 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 TAF5Q15542 800 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SOWAHAQ2M3V2 549 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 EMC10Q5UCC4 262 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ARL6IP4Q66PJ3 421 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 RNF44Q7L0R7 432 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 LPCAT2Q7L5N7 544 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ZNF720Q7Z2F6 126 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SFR1Q86XK3 245 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 FAM90A1Q86YD7 464 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ADGRF2Q8IZF7 708 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 DEFB119Q8N690 84 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 CSGALNACT2Q8N6G5 542 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 FSIP1Q8NA03 581 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 NAXEQ8NCW5 288 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 OLIG1Q8TAK6 271 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 NOC3LQ8WTT2 800 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SNX22Q96L94 193 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 AK8Q96MA6 479 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 FNBP1Q96RU3 617 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ADOQ96SZ5 270 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SORBS1Q9BX66 1292 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 TMEM74BQ9NUR3 256 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 TBC1D7Q9P0N9 293 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 KLK13Q9UKR3 277 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 MMP17Q9ULZ9 603 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 RUVBL1Q9Y265 456 aaKnown RBP5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 SNX9Q9Y5X1 595 aa5.69□□□□□ -1.5
HNRNPC-233ENST00000557768 FASNP49327 2511 aaKnown RBP5.68□□□□□ -1.5
HNRNPC-233ENST00000557768 TMEM8BA6NDV4 472 aa5.68□□□□□ -1.5
HNRNPC-233ENST00000557768 MYMKA6NI61 221 aa5.68□□□□□ -1.5
HNRNPC-233ENST00000557768 LGALS16A8MUM7 142 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms