RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ARRDC2Q8TBH0 407 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 HDAC11Q96DB2 347 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 ANP32EQ9BTT0 268 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 BRD8Q9H0E9 1235 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 ABCG4Q9H172 646 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 CYP4F12Q9HCS2 524 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 INTUQ9ULD6 942 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 CSNK1G3Q9Y6M4 447 aa20.65■□□□□ 0.9
HIF1A-206ENST00000553999 MT-CO3P00414 261 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 TNFP01375 233 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 CYLC1P35663 651 aaPredicted RBP20.64■□□□□ 0.89
HIF1A-206ENST00000553999 PEX5P50542 639 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 PPIDQ08752 370 aaKnown RBP20.64■□□□□ 0.89
HIF1A-206ENST00000553999 ILKQ13418 452 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 GALNT3Q14435 633 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 AGERQ15109 404 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 PCSK7Q16549 785 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 SLC9A4Q6AI14 798 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 TRIM74Q86UV6 250 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 PDCD7Q8N8D1 485 aaKnown RBP20.64■□□□□ 0.89
HIF1A-206ENST00000553999 OR56A4Q8NGH8 313 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 CCL4L1Q8NHW4 92 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 TPCN2Q8NHX9 752 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 PTCD2Q8WV60 388 aaKnown RBP20.64■□□□□ 0.89
HIF1A-206ENST00000553999 DTD2Q96FN9 168 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 AGAP3Q96P47 875 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 DCBLD2Q96PD2 775 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 TSGA13Q96PP4 275 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 TDRD1Q9BXT4 1180 aaKnown RBP20.64■□□□□ 0.89
HIF1A-206ENST00000553999 GPR34Q9UPC5 381 aa20.64■□□□□ 0.89
HIF1A-206ENST00000553999 KMT2BQ9UMN6 2715 aaPredicted RBP20.63■□□□□ 0.89
HIF1A-206ENST00000553999 CFAP69A5D8W1 941 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 LMO7DNF2Z398 122 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 TOR1BO14657 336 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 CAPNS1P04632 268 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 PECAM1P16284 738 aaPredicted RBP20.63■□□□□ 0.89
HIF1A-206ENST00000553999 TGM2P21980 687 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 SLC1A1P43005 524 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 BLKP51451 505 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 DUSP3P51452 185 aaPredicted RBP20.63■□□□□ 0.89
HIF1A-206ENST00000553999 KIAA1024LP59773 190 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 RALGPS1Q5JS13 557 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 C6orf132Q5T0Z8 1188 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 ESRP1Q6NXG1 681 aaKnown RBP20.63■□□□□ 0.89
HIF1A-206ENST00000553999 CNTD1Q8N815 330 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 FAM181AQ8N9Y4 354 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 SCAMP4Q969E2 229 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 SCRN2Q96FV2 425 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 TMEM168Q9H0V1 697 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 PCDH9Q9HC56 1237 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 EVA1BQ9NVM1 165 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 DDX56Q9NY93 547 aaKnown RBP20.63■□□□□ 0.89
HIF1A-206ENST00000553999 ALG6Q9Y672 507 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 LRP4O75096 1905 aa20.63■□□□□ 0.89
HIF1A-206ENST00000553999 A0A1W2PQ67 120 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 RCCD1A6NED2 376 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 B4DGG1 531 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 AGRPO00253 132 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 FZD6O60353 706 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 PIRTP0C851 137 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 CDK4P11802 303 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 NFKBIAP25963 317 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 POLD2P49005 469 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 NAP1L1P55209 391 aaKnown RBP20.62■□□□□ 0.89
HIF1A-206ENST00000553999 E2F1Q01094 437 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 ELOCQ15369 112 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 LRRC38Q5VT99 294 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 TAF8Q7Z7C8 310 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 FSTL5Q8N475 847 aaPredicted RBP20.62■□□□□ 0.89
HIF1A-206ENST00000553999 SPC24Q8NBT2 197 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 ACRBPQ8NEB7 543 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 ATL2Q8NHH9 583 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 NXPE2Q96DL1 559 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 MRFAP1L1Q96HT8 127 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 MCCC1Q96RQ3 725 aaPredicted RBP20.62■□□□□ 0.89
HIF1A-206ENST00000553999 RBM15Q96T37 977 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■□□□□ 11.3
HIF1A-206ENST00000553999 CARS2Q9HA77 564 aaKnown RBP20.62■□□□□ 0.89
HIF1A-206ENST00000553999 SALL4Q9UJQ4 1053 aa20.62■□□□□ 0.89
HIF1A-206ENST00000553999 A0A0J9YYE9 177 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 INPP4BO15327 924 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 CST8O60676 142 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 CSO75390 466 aaKnown RBP20.61■□□□□ 0.89
HIF1A-206ENST00000553999 CLDN7O95471 211 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 PRLP01236 227 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 TRBC1P01850 177 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 MMP2P08253 660 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 MYCLP1P12525 358 aaPredicted RBP20.61■□□□□ 0.89
HIF1A-206ENST00000553999 CDKN2BP42772 138 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 GPR1P46091 355 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 GNPDA1P46926 289 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 SKOR1P84550 965 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 ADCY2Q08462 1091 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 PDK1Q15118 436 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 RAD9BQ6WBX8 426 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 SPOCD1Q6ZMY3 1216 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 MARK2Q7KZI7 788 aaKnown RBP20.61■□□□□ 0.89
HIF1A-206ENST00000553999 DAAM2Q86T65 1068 aa20.61■□□□□ 0.89
HIF1A-206ENST00000553999 ZC3H18Q86VM9 953 aaKnown RBP20.61■□□□□ 0.89
HIF1A-206ENST00000553999 GKN2Q86XP6 184 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms