RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 PIGNO95427 931 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 PENKP01210 267 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 CCDC166P0CW27 439 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 CTPS1P17812 591 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 FDXRP22570 491 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 CSNK1DP48730 415 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 STK19P49842 368 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 CDKN1CP49918 316 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 ZBTB16Q05516 673 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 SPDYAQ5MJ70 313 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ARMC12Q5T9G4 340 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 LIPMQ5VYY2 423 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 FAM45BPQ6NSW5 357 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 SDCCAG8Q86SQ7 713 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 RBM23Q86U06 439 aaKnown RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 PIM3Q86V86 326 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 LEMD2Q8NC56 503 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 FAM45AQ8TCE6 357 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 PPP4R1Q8TF05 950 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 MYO19Q96H55 970 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 UBXN10Q96LJ8 280 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 MRPL57Q9BQC6 102 aaKnown RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 FKBPLQ9UIM3 349 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 LAMA3Q16787 3333 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 TMEM114B3SHH9 223 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 TRAFD1O14545 582 aaPredicted RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 LTA4HP09960 611 aaKnown RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 CEBPBP17676 345 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 TARSP26639 723 aaKnown RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 SKIV2L2P42285 1042 aaKnown RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 EPHB1P54762 984 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 SLC20A2Q08357 652 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 FUT11Q495W5 492 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 ASRGL1Q7L266 308 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 MAVSQ7Z434 540 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 SREK1Q8WXA9 508 aaKnown RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 ING5Q8WYH8 240 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 EID2BQ96D98 161 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 EBF4Q9BQW3 602 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 MRPL46Q9H2W6 279 aaKnown RBP16.85■□□□□ 0.29
SREK1-212ENST00000522912 TLE6Q9H808 572 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 SLC40A1Q9NP59 571 aa16.85■□□□□ 0.29
SREK1-212ENST00000522912 SOBPA7XYQ1 873 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 NEDD8-MDP1E9PL57 170 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 STX7O15400 261 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 HTRA2O43464 458 aaPredicted RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 H2AFYO75367 372 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 CBX6O95503 412 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 ALPIP09923 528 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 SRCP12931 536 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 PMLP29590 882 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 GRIA4P48058 902 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 BCL2L1Q07817 233 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 CBX2Q14781 532 aaPredicted RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 FAM83EQ2M2I3 478 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 TECRLQ5HYJ1 363 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 ADGRD2Q7Z7M1 963 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 WDR75Q8IWA0 830 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 IRF7Q92985 503 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 VOPP1Q96AW1 172 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 SGF29Q96ES7 293 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 AARSD1Q9BTE6 412 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 WWP1Q9H0M0 922 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 TXLNGQ9NUQ3 528 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 INTS10Q9NVR2 710 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 HACD3Q9P035 362 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 HAO1Q9UJM8 370 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 ZNF711Q9Y462 761 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 FCHO1O14526 889 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 ZNF195O14628 629 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 HSPA4LO95757 839 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 MC4RP32245 332 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 CCR10P46092 362 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 USP4Q13107 963 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 GPM6BQ13491 265 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 PEX6Q13608 980 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 AGAP9Q5VTM2 703 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 FBXW10Q5XX13 1052 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 LYSMD3Q7Z3D4 306 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 PIANPQ8IYJ0 282 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 KIF2BQ8N4N8 673 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 ZNF781Q8N8C0 355 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 TXNDC5Q8NBS9 432 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 SCG3Q8WXD2 468 aaKnown RBP16.84■□□□□ 0.29
SREK1-212ENST00000522912 LPGAT1Q92604 370 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 KLHL29Q96CT2 875 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 BBS2Q9BXC9 721 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 NMUR2Q9GZQ4 415 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 FAM96AQ9H5X1 160 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 SAR1AQ9NR31 198 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 SPHK2Q9NRA0 654 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 ZDHHC7Q9NXF8 308 aa16.84■□□□□ 0.29
SREK1-212ENST00000522912 SCN8AQ9UQD0 1980 aa16.83■□□□□ 0.29
SREK1-212ENST00000522912 ATP5HO75947 161 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms