RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 FCRL4Q96PJ5 515 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 ZNF224Q9NZL3 707 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 CCR3P51677 355 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 CBX3Q13185 183 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 ANXA8L1Q5VT79 327 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 OR2T12Q8NG77 320 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 VANGL1Q8TAA9 524 aaPredicted RBP16.7■□□□□ 0.26
MTCL1-205ENST00000517570 ZYG11BQ9C0D3 744 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 SP140LQ9H930 580 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 ELL3Q9HB65 397 aaPredicted RBP16.7■□□□□ 0.26
MTCL1-205ENST00000517570 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
MTCL1-205ENST00000517570 PSMD10O75832 226 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CTPS1P17812 591 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RAB25P57735 213 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 BICRALQ6AI39 1079 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 OR4L1Q8NH43 312 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RGS10O43665 173 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CTSKP43235 329 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 POLR2JP52435 117 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CERCAMQ5T4B2 595 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PIK3R6Q5UE93 754 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 MEIOBQ8N635 442 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 DDX4Q9NQI0 724 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 FBXO10Q9UK96 956 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 SLC6A2P23975 617 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 HNF4AP41235 474 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CDH13P55290 713 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 TCEA2Q15560 299 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 GLYATQ6IB77 296 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 UNC93AQ86WB7 457 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PIK3C3Q8NEB9 887 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PNPT1Q8TCS8 783 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 ATL1Q8WXF7 558 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 ALG3Q92685 438 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 SAMD4AQ9UPU9 718 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 FAM149AA5PLN7 773 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 AP3D1O14617 1153 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RTP1P59025 263 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 TOMM20Q15388 145 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PSMD5Q16401 504 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CPSF6Q16630 551 aaKnown RBP eCLIP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 CXorf57Q6NSI4 855 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RFWD3Q6PCD5 774 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 SLC44A1Q8WWI5 657 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PIGKQ92643 395 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 KCNS3Q9BQ31 491 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 PGRMC2O15173 223 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 DENND1CQ8IV53 801 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 C1GALT1C1Q96EU7 318 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RBM4BQ9BQ04 359 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 RBM4Q9BWF3 364 aaKnown RBP16.69■□□□□ 0.26
MTCL1-205ENST00000517570 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
MTCL1-205ENST00000517570 BMP7P18075 431 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 KLRC2P26717 231 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SDC2P34741 201 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SCAIQ8N9R8 606 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SEMA3CQ99985 751 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PRDM8Q9NQV8 689 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 NKIRAS2Q9NYR9 191 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 KIAA1210Q9ULL0 1709 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 CCDC189A1A4V9 331 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 NOS1APO75052 506 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 IFNA16P05015 189 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 TSC22D1Q15714 1073 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PPP1R26Q5T8A7 1209 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PDPRQ8NCN5 879 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 DENND2DQ9H6A0 471 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 RNF225M0QZC1 329 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 RLN1P04808 185 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 MC4RP32245 332 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 RPL3P39023 403 aaKnown RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 CNTN2Q02246 1040 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SIM2Q14190 667 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 ECM1Q16610 540 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 HDAC10Q969S8 669 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PCDHB12Q9Y5F1 795 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 GMEB1Q9Y692 573 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SHOX2O60902 331 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 TBL1XO60907 577 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PEX2P28328 305 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 AQP4P55087 323 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 SCRN3Q0VDG4 424 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 TCEAL5Q5H9L2 206 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 FBXL19Q6PCT2 694 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 TRPV3Q8NET8 790 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 ZNF607Q96SK3 696 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 PCDHB18PQ96TA0 734 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
MTCL1-205ENST00000517570 UXTQ9UBK9 157 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-205ENST00000517570 STX16-NPEPL1H3BU86 382 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 2782.4 ms