RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PKP1Q13835 747 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 IL11RAQ14626 422 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ASIC2Q16515 512 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 CDONQ4KMG0 1287 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ALG10Q5BKT4 473 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ALG10BQ5I7T1 473 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 TSTD2Q5T7W7 516 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 DAB2IPQ5VWQ8 1189 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ISM2Q6H9L7 571 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SLC2A7Q6PXP3 512 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 PET117Q6UWS5 81 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 BHLHA9Q7RTU4 235 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SERPINA11Q86U17 422 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 TSPAN33Q86UF1 283 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 EPHX4Q8IUS5 362 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 LURAP1LQ8IV03 231 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 MCEMP1Q8IX19 187 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 CHCHD4Q8N4Q1 142 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 GJC3Q8NFK1 279 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 RASSF8Q8NHQ8 419 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 KIF18AQ8NI77 898 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF398Q8TD17 642 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 PTPMT1Q8WUK0 201 aaPredicted RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 FBXL8Q96CD0 374 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SIPA1Q96FS4 1042 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 RITA1Q96K30 269 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 FER1L6-AS2Q96M78 137 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 DENND2DQ9H6A0 471 aaPredicted RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 OPA3Q9H6K4 179 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 MAGEE1Q9HCI5 957 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 CWC15Q9P013 229 aaKnown RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SH3BP4Q9P0V3 963 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 RNF7Q9UBF6 113 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 LSM4Q9Y4Z0 139 aaKnown RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 SNX5Q9Y5X3 404 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 A3GALT2U3KPV4 340 aa4.62□□□□□ -1.67
VPS13A-211ENST00000484581 COL11A2P13942 1736 aaPredicted RBP4.62□□□□□ -1.67
VPS13A-211ENST00000484581 C17orf102A2RUQ5 167 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 DNAJC9-AS1A6NH13 148 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 DDTLA6NHG4 134 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 OGG1O15527 345 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 KLK8O60259 260 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 C1QL1O75973 258 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 RECQL5O94762 991 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 SLU7O95391 586 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 WNT1P04628 370 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ETFAP13804 333 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MMP9P14780 707 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ATP6V1B1P15313 513 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ITGB6P18564 788 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 WT1P19544 449 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ACADLP28330 430 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 CCR3P51677 355 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MRPS34P82930 218 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 PMPCAQ10713 525 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 KCNC3Q14003 757 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF805Q5CZA5 627 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 RARS2Q5T160 578 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 NCAPH2Q6IBW4 605 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 TRAT1Q6PIZ9 186 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 NOXA1Q86UR1 476 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 AACSQ86V21 672 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ARID3BQ8IVW6 561 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 SLC35F3Q8IY50 421 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ZDHHC23Q8IYP9 409 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 FAM185AQ8N0U4 392 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 GUF1Q8N442 669 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 DPP10Q8N608 796 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 TC2NQ8N9U0 490 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MSANTD4Q8NCY6 345 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MCPH1Q8NEM0 835 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 HUS1BQ8NHY5 278 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 GDAP1Q8TB36 358 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 BCAS4Q8TDM0 211 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 TRPC4APQ8TEL6 797 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 PIGOQ8TEQ8 1089 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 SNAPC3Q92966 411 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 RRNAD1Q96FB5 475 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 SLC41A2Q96JW4 573 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 CEP295NLQ96MC4 621 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 SPAG5Q96R06 1193 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 CITED2Q99967 270 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 FAM110AQ9BQ89 295 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 NAA11Q9BSU3 229 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 DESI2Q9BSY9 194 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 ST6GALNAC4Q9H4F1 302 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MOV10Q9HCE1 1003 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 IL17RBQ9NRM6 502 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 RNF146Q9NTX7 359 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 MTRRQ9UBK8 725 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 TUBE1Q9UJT0 475 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 PLAGL1Q9UM63 463 aa4.61□□□□□ -1.67
VPS13A-211ENST00000484581 POLR2AP24928 1970 aaKnown RBP4.61□□□□□ -1.67
VPS13A-211ENST00000484581 GPR75-ASB3A0A0A6YYF3 556 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 A0A1B0GVM2 712 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 DPPA5A6NC42 116 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 SMTNL1A8MU46 457 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 FOXO6A8MYZ6 492 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 TARM1B6A8C7 271 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ZC3H11AO75152 810 aaKnown RBP eCLIP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms