RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CAMK1DQ8IU85 385 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 RYBPQ8N488 228 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 TBC1D15Q8TC07 691 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 DNAJB3Q8WWF6 145 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 POLR1BQ9H9Y6 1135 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 RBM22Q9NW64 420 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 BTRCQ9Y297 605 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 IPPQ9Y573 584 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 PIP5K1BO14986 540 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 SMPD1P17405 629 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 IMPDH1P20839 514 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 POLD2P49005 469 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 MAXP61244 160 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 PPIL2Q13356 520 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 GEN1Q17RS7 908 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 PYCR3Q53H96 274 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 RABL3Q5HYI8 236 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 SMG8Q8ND04 991 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 TRPC4APQ8TEL6 797 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 HDAC10Q969S8 669 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 THAP11Q96EK4 314 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 UBXN10Q96LJ8 280 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 IL12RB2Q99665 862 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 ABCD2Q9UBJ2 740 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 CRYL1Q9Y2S2 319 aa11.75□□□□□ -0.53
PDZRN3-203ENST00000462146 LTBP3Q9NS15 1303 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 GABRDO14764 452 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 CLOCKO15516 846 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ANXA9O76027 345 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 SNAP29O95721 258 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 SLC6A2P23975 617 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 CCNCP24863 283 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 FASP25445 335 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PSMA4P25789 261 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ATP6V0D1P61421 351 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 CBX3Q13185 183 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 RAB41Q5JT25 222 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 KCTD8Q6ZWB6 473 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ISCA2Q86U28 154 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 CROCCP3Q8IVE0 287 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 DNAJB14Q8TBM8 379 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 MAGEE2Q8TD90 523 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ROPN1LQ96C74 230 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PIF1Q9H611 641 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 TUBA8Q9NY65 449 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 MARCH4Q9P2E8 410 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 NUDT5Q9UKK9 219 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 H3BMM5 538 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 J3QRK9 145 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 AP3B1O00203 1094 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 INPP4BO15327 924 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PSMD3O43242 534 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 KPNA6O60684 536 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 KCNE1P15382 129 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PAMP19021 973 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PGFP49763 221 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ARSDP51689 593 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 TBPL2Q6SJ96 375 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 RANBP10Q6VN20 620 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 DDIASQ8IXT1 998 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PCYOX1LQ8NBM8 494 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 TNIP2Q8NFZ5 429 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 OR13J1Q8NGT2 312 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ADAMTS16Q8TE57 1224 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 DQX1Q8TE96 717 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 ZUFSPQ96AP4 578 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 VPS33AQ96AX1 596 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 FBXL8Q96CD0 374 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 SENP8Q96LD8 212 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 POLR3BQ9NW08 1133 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 MPP6Q9NZW5 540 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 KCTD3Q9Y597 815 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
PDZRN3-203ENST00000462146 TRIM64A6NGJ6 449 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 ANGPT2O15123 496 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 CDK14O94921 469 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 LINC00032P0C843 101 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 GFAPP14136 432 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 DNAJB2P25686 324 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 LEPRP48357 1165 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 ACADVLP49748 655 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 GEMP55040 296 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 IHHQ14623 411 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 INPP5AQ14642 412 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 PTPRCAPQ14761 206 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 ACAP2Q15057 778 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 CYP51A1Q16850 503 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 FUT11Q495W5 492 aa11.73□□□□□ -0.53
PDZRN3-203ENST00000462146 PHYKPLQ8IUZ5 450 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms