RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NUS1Q96E22 293 aa18.04■□□□□ 0.48
CHCHD3-203ENST00000448878 CATSPER2Q96P56 530 aa18.04■□□□□ 0.48
CHCHD3-203ENST00000448878 PDFQ9HBH1 243 aa18.04■□□□□ 0.48
CHCHD3-203ENST00000448878 DONSONQ9NYP3 566 aa18.04■□□□□ 0.48
CHCHD3-203ENST00000448878 PCDHGA3Q9Y5H0 932 aa18.04■□□□□ 0.48
CHCHD3-203ENST00000448878 EFCAB7A8K855 629 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 FGF10O15520 208 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 NKX2-8O15522 239 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 DAPK3O43293 454 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 PRAMEF11O60813 436 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 MYCLP1P12525 358 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 CHRNB2P17787 502 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 CASRP41180 1078 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 FOXK1P85037 733 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 TRA2AQ13595 282 aaKnown RBP eCLIP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SYCP1Q15431 976 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 CLPPQ16740 277 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SNAP47Q5SQN1 464 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 DCAF12Q5T6F0 453 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 TRIM72Q6ZMU5 477 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 HEATR4Q86WZ0 1026 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 NRROSQ86YC3 692 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 OR4D9Q8NGE8 314 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 C9orf43Q8TAL5 461 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 PDCD6IPQ8WUM4 868 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 KIAA1143Q96AT1 154 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 AHCYL2Q96HN2 611 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 ASPSCR1Q9BZE9 553 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SLC39A8Q9C0K1 460 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 GPN2Q9H9Y4 310 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SP110Q9HB58 689 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 NLRC4Q9NPP4 1024 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 OCIAD1Q9NX40 245 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 KCNK4Q9NYG8 393 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 TUBD1Q9UJT1 453 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 ANAPC2Q9UJX6 822 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SUFUQ9UMX1 484 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 SDK2Q58EX2 2172 aa18.03■□□□□ 0.48
CHCHD3-203ENST00000448878 TRBV23OR9-2A0A075B6M9 112 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 A8MU76 341 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 DFFAO00273 331 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 DESP17661 470 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 GPR3P46089 330 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 CSNK1DP48730 415 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 NDST2P52849 883 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 POLR2FP61218 127 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 AFMIDQ63HM1 303 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 DOK6Q6PKX4 331 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 ZNF438Q7Z4V0 828 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 DDA1Q9BW61 102 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 LRRC19Q9H756 370 aa18.02■□□□□ 0.48
CHCHD3-203ENST00000448878 SIGLEC16A6NMB1 481 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 PPM1DO15297 605 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 CALB1P05937 261 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 CEACAM5P06731 702 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 UNGP13051 313 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 GM2AP17900 193 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 CR2P20023 1033 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 ERCC5P28715 1186 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 SOX5P35711 763 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 POLD2P49005 469 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 CTBSQ01459 385 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 PTP4A2Q12974 167 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 PEX6Q13608 980 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 ANKS6Q68DC2 871 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 DNAJC24Q6P3W2 148 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 KDELC2Q7Z4H8 507 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 C17orf82Q86X59 251 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 NAGSQ8N159 534 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 MCEEQ96PE7 176 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 PCDHB18PQ96TA0 734 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 CTRCQ99895 268 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 VPS16Q9H269 839 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 GPATCH2LQ9NWQ4 482 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 TRNAU1APQ9NX07 287 aaKnown RBP18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 TAB2Q9NYJ8 693 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 TMEM9Q9P0T7 183 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 B4GALT6Q9UBX8 382 aa18.01■□□□□ 0.47
CHCHD3-203ENST00000448878 DOPEY2Q9Y3R5 2298 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 IGHV1OR21-1A0A087WYE8 117 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 TTC24A2A3L6 582 aaPredicted RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 CAPN5O15484 640 aaPredicted RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 DUX1O43812 170 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 FUCA1P04066 466 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 ACTR1BP42025 376 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 NOP2P46087 812 aaKnown RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 KLK7P49862 253 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 ZNF143P52747 638 aaPredicted RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 AIF1P55008 147 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 ACTR1AP61163 376 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 NR1D2Q14995 579 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 DEFB109BQ30KR1 87 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 RAET1GQ6H3X3 334 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 C16orf46Q6P387 395 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 DCUN1D2Q6PH85 259 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 ZNF761Q86XN6 746 aaPredicted RBP18■□□□□ 0.47
CHCHD3-203ENST00000448878 UNC5BQ8IZJ1 945 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 C3orf20Q8ND61 904 aa18■□□□□ 0.47
CHCHD3-203ENST00000448878 ECHDC3Q96DC8 303 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms