RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TADA2AO75478 443 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PIAS2O75928 621 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ATP6V1G2O95670 118 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CXCL14O95715 111 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 DLGAP3O95886 979 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ITGB3P05106 788 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CNPP09543 421 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 WEE2P0C1S8 567 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM191BP0C7N4 346 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SPATA31D3P0C874 917 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TRIM49P0CI25 452 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TRIM49CP0CI26 452 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CTSAP10619 480 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 NPPBP16860 134 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TFEBP19484 476 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 NR2F2P24468 414 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ITGB7P26010 798 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 EEF1DP29692 281 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 LRPAP1P30533 357 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PAFAH1B1P43034 410 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ACADVLP49748 655 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 NDUFV1P49821 464 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SERPINB8P50452 374 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 STX17P56962 302 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 RPL11P62913 178 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 MRPS25P82663 173 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CYP24A1Q07973 514 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 C17orf67Q0P5P2 114 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 COX10Q12887 443 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF268Q14587 947 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TBCCQ15814 346 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ZBTB6Q15916 424 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PSMD5Q16401 504 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SNRNP35Q16560 246 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 KYAT1Q16773 422 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 DUSP6Q16828 381 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CCDC153Q494R4 210 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ACCSLQ4AC99 568 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ZCWPW2Q504Y3 356 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 BOLA3Q53S33 107 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PRRT3Q5FWE3 981 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CCDC122Q5T0U0 273 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 XP32Q5T750 250 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 FAM69AQ5T7M9 428 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF658Q5TYW1 1059 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 DAB2IPQ5VWQ8 1189 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 KIAA1841Q6NSI8 718 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PSAPL1Q6NUJ1 521 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SLC2A7Q6PXP3 512 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SPATA31D4Q6ZUB0 917 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 IKBIPQ70UQ0 350 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 GPR149Q86SP6 731 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CPNE8Q86YQ8 564 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 RHOT1Q8IXI2 618 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 GUF1Q8N442 669 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 LZTR1Q8N653 840 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 C12orf76Q8N812 135 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 MRPL43Q8N983 215 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 XXYLT1Q8NBI6 393 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 AGBL5Q8NDL9 886 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 STKLD1Q8NE28 680 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 BEST2Q8NFU1 509 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 OR14C36Q8NHC7 312 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SPATA20Q8TB22 786 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 BRIX1Q8TDN6 353 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 GRK7Q8WTQ7 553 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 NUDT8Q8WV74 236 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 HSPH1Q92598 858 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 VPS33AQ96AX1 596 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 HAPLN3Q96S86 360 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 VRK1Q99986 396 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TRIM54Q9BYV2 358 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CLSTN2Q9H4D0 955 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CHODLQ9H9P2 273 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 COPS7BQ9H9Q2 264 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 LIN28AQ9H9Z2 209 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CLK4Q9HAZ1 481 aaKnown RBP4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ANO10Q9NW15 660 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 RMND1Q9NWS8 449 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 DPP3Q9NY33 737 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 TAB2Q9NYJ8 693 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF212Q9UDV6 495 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 PRSS50Q9UI38 385 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 SIX4Q9UIU6 781 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 LAMP5Q9UJQ1 280 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ANAPC5Q9UJX4 755 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 HSF4Q9ULV5 492 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 HPCAL4Q9UM19 191 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 AP4E1Q9UPM8 1137 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 CTNND2Q9UQB3 1225 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 NAALADL1Q9UQQ1 740 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 C2CD2Q9Y426 696 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 ANGPTL3Q9Y5C1 460 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 HCFC2Q9Y5Z7 792 aa4.63□□□□□ -1.67
SF3B1-202ENST00000409915 VWA8A3KMH1 1905 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TRBV23OR9-2A0A075B6M9 112 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 A0A0U1RQK1 487 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 UBA6A0AVT1 1052 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms