RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 AP1G1O43747 822 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 GJB5O95377 273 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 BAG2O95816 211 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 HMBSP08397 361 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 TACR2P21452 398 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 SLC26A3P40879 764 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 SREBF2Q12772 1141 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 POLD3Q15054 466 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 NFE2Q16621 373 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 EID2BQ96D98 161 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 GIMAP2Q9UG22 337 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 CRYL1Q9Y2S2 319 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 A0A0U1RQS6 177 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 SLC2A3P11169 496 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 FBXO32Q969P5 355 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PHF21BQ96EK2 531 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 ASB1Q9Y576 335 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PRORSD1PA6NEY8 169 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 E7ENX8 843 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 GREM1O60565 184 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 CDK14O94921 469 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 HMGA1P17096 107 aaKnown RBP15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PAMP19021 973 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 ZXDBP98169 803 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 CFAP157Q5JU67 520 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PAOXQ6QHF9 649 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 RNF135Q8IUD6 432 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PCSK9Q8NBP7 692 aaKnown RBP15.4■□□□□ 0.06
CPSF7-202ENST00000394888 GPATCH1Q9BRR8 931 aaKnown RBP15.4■□□□□ 0.06
CPSF7-202ENST00000394888 MAP10Q9P2G4 905 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PSMD13Q9UNM6 376 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 ASPDHA6ND91 283 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 GFRA2O00451 464 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 KIF1CO43896 1103 aaKnown RBP15.4■□□□□ 0.06
CPSF7-202ENST00000394888 SIX3O95343 332 aaPredicted RBP15.4■□□□□ 0.06
CPSF7-202ENST00000394888 UQCRBP14927 111 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 MAPKAPK2P49137 400 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 CDKL1Q00532 357 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PQLC1Q8N2U9 271 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 LPGAT1Q92604 370 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 PKP2Q99959 881 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 SLC2A11Q9BYW1 496 aa15.4■□□□□ 0.06
CPSF7-202ENST00000394888 DNAJA2O60884 412 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 C8BP07358 591 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 STC1P52823 247 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 HERVK_113P63132 956 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 PRSS55Q6UWB4 352 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 BNC2Q6ZN30 1099 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 LMNTD2Q8IXW0 634 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 OR7D4Q8NG98 312 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 PEX13Q92968 403 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ZFRQ96KR1 1074 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ERVK-6Q9BXR3 956 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 KLHL4Q9C0H6 718 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 TMEM181Q9P2C4 612 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 RIMKLBQ9ULI2 386 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ZFC3H1O60293 1989 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 SLC12A8A0AV02 714 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 MAGEA13PA6NCF6 341 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 CAPN8A6NHC0 703 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 NT5C1B-RDH14C9J2C7 533 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 RAMP2O60895 175 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 RNASEH2AO75792 299 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 EPOP01588 193 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 PRR35P0CG20 571 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ADGRE1Q14246 886 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 CYTH1Q15438 398 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 KANK2Q63ZY3 851 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 REP15Q6BDI9 236 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 CXorf57Q6NSI4 855 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 HMBOX1Q6NT76 420 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ARHGAP18Q8N392 663 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 ATP6V0D2Q8N8Y2 350 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 KCNA7Q96RP8 456 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 FXYD1O00168 92 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 VCLP18206 1134 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 OR1E1P30953 314 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 MRPS22P82650 360 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 DUSP4Q13115 394 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 TMEM150AQ86TG1 271 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 PPP2R3CQ969Q6 453 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 AARSD1Q9BTE6 412 aaKnown RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 NLE1Q9NVX2 485 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-202ENST00000394888 NEUROG3Q9Y4Z2 214 aa15.39■□□□□ 0.05
CPSF7-202ENST00000394888 OR6C75A6NL08 312 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 SLC38A8A6NNN8 435 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 KLK8O60259 260 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 SNUPNO95149 360 aaKnown RBP15.38■□□□□ 0.05
CPSF7-202ENST00000394888 HK3P52790 923 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 C10orf120Q5SQS8 335 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 DUS3LQ96G46 650 aaKnown RBP15.38■□□□□ 0.05
CPSF7-202ENST00000394888 UTP6Q9NYH9 597 aaKnown RBP15.38■□□□□ 0.05
CPSF7-202ENST00000394888 UBXN8O00124 270 aa15.38■□□□□ 0.05
CPSF7-202ENST00000394888 CD3EAPO15446 510 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms