RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 BTRCQ9Y297 605 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ILVBLA1L0T0 632 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MEI4A8MW99 385 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 HAS3O00219 553 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 SLC31A1O15431 190 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MAT2AP31153 395 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CLDN10P78369 228 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 TGM3Q08188 693 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 RIPOR1Q6ZS17 1223 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 NXNL1Q96CM4 212 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 FCRL5Q96RD9 977 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 NDOR1Q9UHB4 597 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 NDUFAF1Q9Y375 327 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CITO14578 2027 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ANKDD1BA6NHY2 528 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 AMD1P17707 334 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ELP6Q0PNE2 266 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MBLAC2Q68D91 279 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ZDHHC24Q6UX98 284 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ATL1Q8WXF7 558 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 AHCYL2Q96HN2 611 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 GOT2P00505 430 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 HCAR3P49019 387 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 USP4Q13107 963 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 COLGALT2Q8IYK4 626 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MYH10P35580 1976 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CEP290O15078 2479 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 COCHO43405 550 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 ULK1O75385 1050 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 PTPN4P29074 926 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 CERS6Q6ZMG9 384 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM120BQ96EK7 910 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 TMLHEQ9NVH6 421 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 MRASO14807 208 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 SCAMP1O15126 338 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 RGS14O43566 566 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 EIF2S1P05198 315 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 EEF1DP29692 281 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 GCKP35557 465 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 OLIG2Q13516 323 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 OR13C4Q8NGS5 318 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 PHPT1Q9NRX4 125 aaPredicted RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 CIDEBQ9UHD4 219 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX5Q9Y5X3 404 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 RFPL2O75678 378 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 EPHA3P29320 983 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 CORO7P57737 925 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 RCN1Q15293 331 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 SLC1A5Q15758 541 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 ALFQ53S48 1182 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 LIPMQ5VYY2 423 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 ASZ1Q8WWH4 475 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 KLK6Q92876 244 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 MYLK2Q9H1R3 596 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 SELENONQ9NZV5 590 aa13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-202ENST00000389416 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 LBPP18428 481 aa13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 MAD2L1Q13257 205 aaPredicted RBP13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 Q6ZVU0 165 aa13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 ZNF513Q8N8E2 541 aaPredicted RBP13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 ZSCAN18Q8TBC5 510 aaPredicted RBP13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
PTPRN2-202ENST00000389416 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms