RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 IPMKQ8NFU5 416 aa17.35■□□□□ 0.37
LDLRAP1-201ENST00000374338 TFAP2CQ92754 450 aa17.35■□□□□ 0.37
LDLRAP1-201ENST00000374338 CDKL2Q92772 493 aa17.35■□□□□ 0.37
LDLRAP1-201ENST00000374338 CEP295NLQ96MC4 621 aa17.35■□□□□ 0.37
LDLRAP1-201ENST00000374338 UNC80Q8N2C7 3258 aa17.35■□□□□ 0.37
LDLRAP1-201ENST00000374338 TRIM64A6NGJ6 449 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 TK2O00142 265 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CLOCKO15516 846 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 AKAP10O43572 662 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 BCL10O95999 233 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CHRNA1P02708 482 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 HOXD8P13378 290 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PGAM1P18669 254 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 HPCAL1P37235 193 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CHRNA4P43681 627 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CRYBB1P53674 252 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 FAAH2Q6GMR7 532 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 EPGNQ6UW88 154 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 AGMOQ6ZNB7 445 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 ZNF467Q7Z7K2 595 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 DENND6AQ8IWF6 608 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 RABL2BQ9UNT1 228 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 LRP8Q14114 963 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PGS1Q32NB8 556 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 FAM117BQ6P1L5 589 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 LAYNQ6UX15 382 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PPWD1Q96BP3 646 aaKnown RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PCDH10Q9P2E7 1040 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 SLC27A5Q9Y2P5 690 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 C9IYK1 514 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PMPCBO75439 489 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 MYCLP1P12525 358 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 GJA9P57773 515 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PURAQ00577 322 aaKnown RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 ART3Q13508 389 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 PITRM1Q5JRX3 1037 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 LDLRAP1Q5SW96 308 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CST9Q5W186 159 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 APBB2Q92870 758 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 CENPOQ9BU64 300 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 TMEM9Q9P0T7 183 aa17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 MTF2Q9Y483 593 aaPredicted RBP17.34■□□□□ 0.37
LDLRAP1-201ENST00000374338 RGSL1A5PLK6 1076 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 TMEM233B4DJY2 109 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 KMOO15229 486 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 WARSP23381 471 aaKnown RBP17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 THPOP40225 353 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 OPRL1P41146 370 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 PNPLA4P41247 253 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 YAP1P46937 504 aaKnown RBP17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 NKX2-5P52952 324 aaPredicted RBP17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 RFPL4BQ6ZWI9 263 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 SNX29P2Q8IUI4 249 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 CNTD1Q8N815 330 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 C2orf69Q8N8R5 385 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 TRPV1Q8NER1 839 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 LRRC39Q96DD0 335 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 ZNF347Q96SE7 839 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 ZIC5Q96T25 663 aa17.33■□□□□ 0.37
LDLRAP1-201ENST00000374338 A0A096LPK6 155 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 FAM149AA5PLN7 773 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 SAC3D1A6NKF1 404 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 TPST1O60507 370 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 GLRA3O75311 464 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 SOAT2O75908 522 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 KCNH1O95259 989 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 ALOX5P09917 674 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 SOX11P35716 441 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 TUFMP49411 452 aaKnown RBP17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 INAVAQ3KP66 663 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 RNF135Q8IUD6 432 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 SCN4BQ8IWT1 228 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 OR10T2Q8NGX3 314 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 B3GALT6Q96L58 329 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 RTP3Q9BQQ7 232 aa17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 TP63Q9H3D4 680 aaPredicted RBP17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 IPO11Q9UI26 975 aaKnown RBP17.33■□□□□ 0.36
LDLRAP1-201ENST00000374338 C5orf42Q9H799 3197 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 TIPRLO75663 272 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 GPR15P49685 360 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZNF157P51786 506 aaPredicted RBP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 MAXP61244 160 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 MPP1Q00013 466 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 WDR45BQ5MNZ6 344 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 ZBTB49Q6ZSB9 765 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 TFAP2DQ7Z6R9 452 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 DSG4Q86SJ6 1040 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 TNIP2Q8NFZ5 429 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 FBXW11Q9UKB1 542 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 AURKAO14965 403 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 NOL3O60936 208 aaKnown RBP17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 VAPBO95292 243 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 MATN1P21941 496 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 DNASE1L3Q13609 305 aa17.32■□□□□ 0.36
LDLRAP1-201ENST00000374338 SIGIRRQ6IA17 410 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms