RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GPAT4Q86UL3 456 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 TRIM74Q86UV6 250 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 TRIM73Q86UV7 250 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 IGFN1Q86VF2 1251 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 TICAM2Q86XR7 235 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 PDILTQ8N807 584 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 HASPINQ8TF76 798 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 INTS12Q96CB8 462 aaKnown RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 NUDT16L1Q9BRJ7 211 aaKnown RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 CLIC5Q9NZA1 410 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 KLHL13Q9P2N7 655 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 DBF4Q9UBU7 674 aaPredicted RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNHIT2Q9UHR6 403 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 LAMP3Q9UQV4 416 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 PCDHAC2Q9Y5I4 1007 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 MAPK8IP3Q9UPT6 1336 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 FOXO6A8MYZ6 492 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 FAM157AC9JC47 383 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 IFNL4K9M1U5 179 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 SNAP23O00161 211 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 FIBPO43427 364 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 TIMM44O43615 452 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 AHCYL1O43865 530 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 TMCC1O94876 653 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 SEC31AO94979 1220 aaKnown RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 PCCAP05165 728 aaPredicted RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 EDN2P20800 178 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 ELLP55199 621 aaPredicted RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 YWHAZP63104 245 aaKnown RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 OLR1P78380 273 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 STIM1Q13586 685 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC9C1Q4G0N8 1177 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 ATG9BQ674R7 924 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 MIS18BP1Q6P0N0 1132 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 FBXO42Q6P3S6 717 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 AAGABQ6PD74 315 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 FAM57BQ71RH2 274 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 DDIASQ8IXT1 998 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 TTC39CQ8N584 583 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 IGFBPL1Q8WX77 278 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF419Q96HQ0 510 aaPredicted RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 CLMNQ96JQ2 1002 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 SH2D3AQ9BRG2 576 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 IKZF4Q9H2S9 585 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 CTNNAL1Q9UBT7 734 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 CDH22Q9UJ99 828 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 MKLN1Q9UL63 735 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 CORO1CQ9ULV4 474 aaPredicted RBP5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 CAPN7Q9Y6W3 813 aa5.87□□□□□ -1.47
RNU4-39P-201ENST00000362455 NUP98P52948 1817 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 DDTLA6NHG4 134 aaPredicted RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CBY3A6NI87 242 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC25A17O43808 307 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 PRKCGP05129 697 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 HEXAP06865 529 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 HOXB7P09629 217 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC2A4P14672 509 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 YWHAQP27348 245 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 DPP6P42658 865 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CLCNKBP51801 687 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC18A2Q05940 514 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 PKP1Q13835 747 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CCNG2Q16589 344 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 GSTA3Q16772 222 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ALG10Q5BKT4 473 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ALG10BQ5I7T1 473 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 STRIP1Q5VSL9 837 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 TXNDC8Q6A555 127 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ISM2Q6H9L7 571 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CYP20A1Q6UW02 462 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CERS5Q8N5B7 392 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 TMEM116Q8NCL8 245 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CCDC191Q8NCU4 936 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CMASQ8NFW8 434 aaPredicted RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 OR4N2Q8NGD1 307 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 TMEM170AQ8WVE7 144 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ATOH1Q92858 354 aaPredicted RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 CCDC68Q9H2F9 335 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 PNNQ9H307 717 aaKnown RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SYNCQ9H7C4 482 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 AAMDCQ9H7C9 122 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SCPEP1Q9HB40 452 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 HCFC1R1Q9NWW0 138 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF70Q9UC06 446 aaPredicted RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLCO3A1Q9UIG8 710 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 INTS6Q9UL03 887 aaKnown RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 A4GNTQ9UNA3 340 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 SZT2Q5T011 3432 aa5.86□□□□□ -1.47
RNU4-39P-201ENST00000362455 LAMB4A4D0S4 1761 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 LRRC37AA6NMS7 1700 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 BRCA2P51587 3418 aa5.85□□□□□ -1.47
RNU4-39P-201ENST00000362455 FAM237BA0A1B0GVD1 139 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms