RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CYP4X1Q8N118 509 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 STYXQ8WUJ0 223 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 DGCR14Q96DF8 476 aaKnown RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 C19orf60Q96EN9 201 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 SATB2Q9UPW6 733 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 MYL12BO14950 172 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 CRATP43155 626 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC5A3P53794 718 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 AMER2Q8N7J2 671 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 NAT8LQ8N9F0 302 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 BPIFB6Q8NFQ5 453 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 LENG8Q96PV6 779 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 NLNQ9BYT8 704 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 TMPRSS4Q9NRS4 437 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 ENTPD4Q9Y227 616 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 GMPPBQ9Y5P6 360 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 E9PAM4 449 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 FOXN2P32314 431 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 CPNE8Q86YQ8 564 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 PYROXD2Q8N2H3 581 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 OR4K2Q8NGD2 314 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 TTPALQ9BTX7 342 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 CST1P01037 141 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 ITGA2P17301 1181 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 PPIBP23284 216 aaKnown RBP17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 GRIN3AQ8TCU5 1115 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 C1QTNF7Q9BXJ2 289 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 ASAH2Q9NR71 780 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNHIT2Q9UHR6 403 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 CDC42P60953 191 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 RHBDF2Q6PJF5 856 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 NELL1Q92832 810 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 OR52E6Q96RD3 313 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 PANX1Q96RD7 426 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 TAS2R1Q9NYW7 299 aa17.1■□□□□ 0.33
TRAPPC11-201ENST00000334690 WARSP23381 471 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CENPAP49450 140 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 RNF208Q9H0X6 261 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SYNDIG1Q9H7V2 258 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 RFXANKO14593 260 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 OR1D2P34982 312 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 PBX3P40426 434 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 DLG2Q15700 870 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CEP78Q5JTW2 689 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 TRMT10BQ6PF06 316 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 GK5Q6ZS86 529 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 OR2T12Q8NG77 320 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 ITCHQ96J02 903 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC39A8Q9C0K1 460 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 MUC13Q9H3R2 512 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 RSL24D1Q9UHA3 163 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CNPP09543 421 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SP3Q02447 781 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 DUSP4Q13115 394 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 ACAP2Q15057 778 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SHISA4Q96DD7 197 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 CADM1Q9BY67 442 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 MSX2P35548 267 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 MAPK10P53779 464 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC5A9Q2M3M2 681 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 LPCAT4Q643R3 524 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNF544Q6NX49 715 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 OFCC1Q8IZS5 231 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 DEPDC4Q8N2C3 294 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 ATAD1Q8NBU5 361 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 DPEP3Q9H4B8 488 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
TRAPPC11-201ENST00000334690 A0A088AWK7 358 aa17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 DUSP11O75319 330 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 EIF2S1P05198 315 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 CTPS1P17812 591 aa17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNF10P21506 573 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 USP46P62068 366 aa17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 TARBP2Q15633 366 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 RSBN1Q5VWQ0 802 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 TAC4Q86UU9 113 aa17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 SPATA22Q8NHS9 363 aa17.08■□□□□ 0.33
TRAPPC11-201ENST00000334690 TBATAQ96M53 351 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms