RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MFN1Q8IWA4 741 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 SPATA17Q96L03 361 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 NPAS2Q99743 824 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 ERVK-6Q9BXR3 956 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 TNFRSF12AQ9NP84 129 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 TLR8Q9NR97 1041 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 MARCH4Q9P2E8 410 aaPredicted RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 EPS15L1Q9UBC2 864 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 RPP40O75818 363 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 PEX19P40855 299 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 ROR2Q01974 943 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 CREB5Q02930 508 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 ITKQ08881 620 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 EFEMP1Q12805 493 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 POLD3Q15054 466 aaPredicted RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 TYSND1Q2T9J0 566 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 TRAF7Q6Q0C0 670 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 PTAR1Q7Z6K3 402 aaPredicted RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 RTN4RL1Q86UN2 441 aaPredicted RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 PAWRQ96IZ0 340 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 CYP2S1Q96SQ9 504 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 DDX50Q9BQ39 737 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 TSEN34Q9BSV6 310 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 UNKQ9C0B0 810 aaKnown RBP25.09■■□□□ 1.61
ROM1-201ENST00000278833 CYP4F12Q9HCS2 524 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 PLK2Q9NYY3 685 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 NDUFA13Q9P0J0 144 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 SLC4A7Q9Y6M7 1214 aa25.09■■□□□ 1.61
ROM1-201ENST00000278833 GBF1Q92538 1859 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 BBIP1A8MTZ0 92 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 SNRPB2P08579 225 aaKnown RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 CD1DP15813 335 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 KPNA1P52294 538 aaPredicted RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 ACLYP53396 1101 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 NAA20P61599 178 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 TRIM25Q14258 630 aaKnown RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 UNC50Q53HI1 259 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 MRNIPQ6NTE8 343 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 CYHR1Q6ZMK1 362 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 TMEM102Q8N9M5 508 aaPredicted RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 LINC01599Q8WXQ3 324 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 FBXO32Q969P5 355 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 PAPOLBQ9NRJ5 636 aaKnown RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 POLR3BQ9NW08 1133 aaPredicted RBP25.08■■□□□ 1.61
ROM1-201ENST00000278833 MARCH2Q9P0N8 246 aa25.08■■□□□ 1.61
ROM1-201ENST00000278833 CAPN8A6NHC0 703 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 FBP2O00757 339 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 CFLARO15519 480 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 DNAJA2O60884 412 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 ZDHHC11BP0C7U3 371 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 SMARCB1Q12824 385 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 RAP1GAP2Q684P5 730 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 UBE2Q1Q7Z7E8 422 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 LILRA2Q8N149 483 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 OR6P1Q8NGX9 317 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 BRSK1Q8TDC3 778 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 USP13Q92995 863 aaPredicted RBP25.07■■□□□ 1.6
ROM1-201ENST00000278833 KLHL32Q96NJ5 620 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.07■■□□□ 1.6
ROM1-201ENST00000278833 PACSIN3Q9UKS6 424 aa25.07■■□□□ 1.6
ROM1-201ENST00000278833 C15orf38-AP3S2A0A0A6YYH1 394 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 UBFD1O14562 309 aaKnown RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 TIAL1Q01085 375 aaKnown RBP eCLIP25.06■■□□□ 1.6
ROM1-201ENST00000278833 UGT3A2Q3SY77 523 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 GPR158Q5T848 1215 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 SDHAF4Q5VUM1 108 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 ARPINQ7Z6K5 226 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 TMA16Q96EY4 203 aaKnown RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 UHRF1Q96T88 793 aaPredicted RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 TFB2MQ9H5Q4 396 aaKnown RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 SPAG4Q9NPE6 437 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 INTS10Q9NVR2 710 aaKnown RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 CD300AQ9UGN4 299 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 PHF24Q9UPV7 400 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 SMIM31A0A1B0GVY4 71 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 GLP2RO95838 553 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 ZNF549Q6P9A3 640 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 RNF135Q8IUD6 432 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 CLYBLQ8N0X4 340 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 ROPN1LQ96C74 230 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 SPATA16Q9BXB7 569 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 ALG9Q9H6U8 611 aa25.06■■□□□ 1.6
ROM1-201ENST00000278833 TRMT13Q9NUP7 481 aaKnown RBP25.06■■□□□ 1.6
ROM1-201ENST00000278833 CD3EAPO15446 510 aaKnown RBP25.05■■□□□ 1.6
ROM1-201ENST00000278833 ZNF37AP17032 561 aaPredicted RBP25.05■■□□□ 1.6
ROM1-201ENST00000278833 MRPL19P49406 292 aaKnown RBP25.05■■□□□ 1.6
ROM1-201ENST00000278833 TLR1Q15399 786 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 USP41Q3LFD5 358 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 AHI1Q8N157 1196 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 PTERQ96BW5 349 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 TRIB3Q96RU7 358 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 SEMA3CQ99985 751 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 AARSD1Q9BTE6 412 aaKnown RBP25.05■■□□□ 1.6
ROM1-201ENST00000278833 TMEM181Q9P2C4 612 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 NOD1Q9Y239 953 aa25.05■■□□□ 1.6
ROM1-201ENST00000278833 A0A1W2PQ45 241 aaPredicted RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 A0A1W2PQY0 241 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 STX16-NPEPL1H3BU86 382 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 GPC4O75487 556 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 SH3BGRP55822 239 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms