RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 FBXL22Q6P050 247 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 PRMT9Q6P2P2 845 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 TFAP2DQ7Z6R9 452 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 GALNT15Q8N3T1 639 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 BRSK1Q8TDC3 778 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 HDAC10Q969S8 669 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 PSMG2Q969U7 264 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 NDNQ99608 321 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 ERVK-6Q9BXR3 956 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 ELAC1Q9H777 363 aaKnown RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 KLHL42Q9P2K6 505 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 UXTQ9UBK9 157 aaPredicted RBP9.89□□□□□ -0.83
MDH1-201ENST00000233114 TRAF6Q9Y4K3 522 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 SLC4A7Q9Y6M7 1214 aa9.89□□□□□ -0.83
MDH1-201ENST00000233114 ANKRD36A6QL64 1941 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SMIM31A0A1B0GVY4 71 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 AURKAO14965 403 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SH3BP5O60239 455 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 GPC4O75487 556 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 NDST3O95803 873 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SNRPB2P08579 225 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 OR4Q2P0C623 313 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 ZDHHC11BP0C7U3 371 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CES1P23141 567 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 MRPL19P49406 292 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 ERFP50548 548 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 STX1BP61266 288 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 ROR2Q01974 943 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 FOLH1Q04609 750 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 EFEMP1Q12805 493 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 LRP8Q14114 963 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 ZNF235Q14590 738 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 DDR2Q16832 855 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 TYSND1Q2T9J0 566 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CTXN3Q4LDR2 81 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 ZNF789Q5FWF6 425 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SAMD4BQ5PRF9 694 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 C8orf82Q6P1X6 216 aaPredicted RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 SLC30A9Q6PML9 568 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 ISCA2Q86U28 154 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CLYBLQ8N0X4 340 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 HIPK4Q8NE63 616 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 BHLHE22Q8NFJ8 381 aaPredicted RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 OR6P1Q8NGX9 317 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 NCSTNQ92542 709 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 ROPN1LQ96C74 230 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SGF29Q96ES7 293 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 PPP1R36Q96LQ0 422 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 TCF12Q99081 682 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 MAGEH1Q9H213 219 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 TFB2MQ9H5Q4 396 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 RRAGCQ9HB90 399 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 SPAG4Q9NPE6 437 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CACNA2D2Q9NY47 1150 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.88□□□□□ -0.838e-7■■■■□ 23.2
MDH1-201ENST00000233114 NUDT5Q9UKK9 219 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 TMCO1Q9UM00 188 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
MDH1-201ENST00000233114 PCDHGA7Q9Y5G6 932 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 CHD5Q8TDI0 1954 aa9.88□□□□□ -0.83
MDH1-201ENST00000233114 NEMP2A6NFY4 417 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 TMEM233B4DJY2 109 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 H7C4K7 107 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 TRIM24O15164 1050 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 CD3EAPO15446 510 aaKnown RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 CFLARO15519 480 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 CNTN5O94779 1100 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 SERPINF2P08697 491 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 PABPC4LP0CB38 370 aaKnown RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 HNRNPLP14866 589 aaKnown RBP eCLIP9.87□□□□□ -0.835e-6■□□□□ 8.4
MDH1-201ENST00000233114 CD1DP15813 335 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 CD9P21926 228 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 KCNA5P22460 613 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 DPP6P42658 865 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 OR1G1P47890 313 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 TM4SF4P48230 202 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 FLT3LGP49771 235 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 ARSDP51689 593 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 PGGT1BP53609 377 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 CDKN2DP55273 166 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 ATP6V0D1P61421 351 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 MRPS22P82650 360 aaKnown RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 LIN52Q52LA3 116 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 COQ5Q5HYK3 327 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 C10orf120Q5SQS8 335 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 RNF220Q5VTB9 566 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 RAP1GAP2Q684P5 730 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 REP15Q6BDI9 236 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 UGT2A3Q6UWM9 527 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 LARP4Q71RC2 724 aaKnown RBP eCLIP9.87□□□□□ -0.832e-9■□□□□ 11.1
MDH1-201ENST00000233114 EFL1Q7Z2Z2 1120 aaKnown RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
MDH1-201ENST00000233114 PTAR1Q7Z6K3 402 aaPredicted RBP9.87□□□□□ -0.83
MDH1-201ENST00000233114 RNF180Q86T96 592 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms