RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 WDR74Q6RFH5 385 aaPredicted RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ARHGAP22Q7Z5H3 698 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 CISD2Q8N5K1 135 aaKnown RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 FUBP1Q96AE4 644 aaKnown RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 MPP6Q9NZW5 540 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 PCDHGA6Q9Y5G7 932 aa11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 MORC2Q9Y6X9 1032 aaPredicted RBP11.03□□□□□ -0.64
PTP4A1-207ENST00000639568 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.64
PTP4A1-207ENST00000639568 SHANK1Q9Y566 2161 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 E5RJQ4 531 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 GARSP41250 739 aaKnown RBP11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 GPD2P43304 727 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 RPL34P49207 117 aaKnown RBP11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 LIG3P49916 1009 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 GNA12Q03113 381 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 DNASE1L3Q13609 305 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 STK38Q15208 465 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 TAF5Q15542 800 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 TCERG1LQ5VWI1 586 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 CPZQ66K79 652 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 ERAP2Q6P179 960 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 XYLT1Q86Y38 959 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 RASGRP3Q8IV61 690 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 DEFB106AQ8N104 65 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 PLA2G15Q8NCC3 412 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 PATE1Q8WXA2 126 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 NCSTNQ92542 709 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 RNF31Q96EP0 1072 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 HMCESQ96FZ2 354 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 ZSWIM1Q9BR11 485 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 WDCPQ9H6R7 721 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 WDR26Q9H7D7 661 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 COPG2Q9UBF2 871 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 KLHL3Q9UH77 587 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 PADI1Q9ULC6 663 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 HPCAL4Q9UM19 191 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 ACTL7AQ9Y615 435 aa11.02□□□□□ -0.65
PTP4A1-207ENST00000639568 DRGXA6NNA5 263 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 C21orf140B9A014 251 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 TEX33O43247 280 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 ZG16O60844 167 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 SRGAP2O75044 1071 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 NADKO95544 446 aaPredicted RBP11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 HOXC4P09017 264 aaPredicted RBP11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 ZNF28P17035 718 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 HOXB4P17483 251 aaPredicted RBP11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 ETFBP38117 255 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 AGERQ15109 404 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 TESK1Q15569 626 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 UGT8Q16880 541 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 ATXN7L2Q5T6C5 722 aaPredicted RBP11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 NRROSQ86YC3 692 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 CEP57L1Q8IYX8 460 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 NAGSQ8N159 534 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 STK32AQ8WU08 396 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 GDAP1L1Q96MZ0 367 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 RANBP9Q96S59 729 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 TKTL2Q9H0I9 626 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 ACTL8Q9H568 366 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 LNPEPQ9UIQ6 1025 aa11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
PTP4A1-207ENST00000639568 CXorf51AA0A1B0GTR3 108 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 KIAA0754O94854 1291 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 NDUFA10O95299 355 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 CALCAP01258 141 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 MT-ND3P03897 115 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 GLI1P08151 1106 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 EPB41P11171 864 aaKnown RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 COX6B1P14854 86 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 AK4P27144 223 aaPredicted RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 GNPDA1P46926 289 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 HDAC4P56524 1084 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 NFIL3Q16649 462 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 CBWD6Q4V339 395 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 DCAF17Q5H9S7 520 aaPredicted RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 CBWD3Q5JTY5 395 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 CBWD5Q5RIA9 395 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 CFAP58Q5T655 872 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 ACBD5Q5T8D3 534 aaPredicted RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 TMEM110Q86TL2 294 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 ZNF761Q86XN6 746 aaPredicted RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 DRC7Q8IY82 874 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 GRAMD1CQ8IYS0 662 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 RBMXL3Q8N7X1 1067 aaKnown RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 UBR7Q8N806 425 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 ARHGEF2Q92974 986 aaKnown RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 HDAC11Q96DB2 347 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 SLC2A13Q96QE2 648 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 LGR4Q9BXB1 951 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 TRNAU1APQ9NX07 287 aaKnown RBP11□□□□□ -0.65
PTP4A1-207ENST00000639568 SNX10Q9Y5X0 201 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 DCHS2Q6V1P9 2916 aa11□□□□□ -0.65
PTP4A1-207ENST00000639568 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
PTP4A1-207ENST00000639568 A6NL46 340 aa10.99□□□□□ -0.65
PTP4A1-207ENST00000639568 KLRC4O43908 158 aa10.99□□□□□ -0.65
PTP4A1-207ENST00000639568 HSF2BPO75031 334 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms