RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CAVIN2O95810 425 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 RHOP08100 348 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 GJA1P17302 382 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 CEBPBP17676 345 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MAGEA9P43362 315 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 GLUD2P49448 558 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 GHRHRQ02643 423 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 POU5F1BQ06416 359 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 ITGB3BPQ13352 177 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 TUBA3CQ13748 450 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 SPATS1Q496A3 300 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 PPM1LQ5SGD2 360 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 DAB2IPQ5VWQ8 1189 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 TUBA3EQ6PEY2 450 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 KLHL17Q6TDP4 642 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MTSS1LQ765P7 747 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 CACNA2D4Q7Z3S7 1137 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MRGPREQ86SM8 312 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 CEP57Q86XR8 500 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 CCDC60Q8IWA6 550 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 HASPINQ8TF76 798 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 FKBP10Q96AY3 582 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF503Q96F45 646 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 ALG8Q9BVK2 526 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MRPL9Q9BYD2 267 aaKnown RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 PABPC3Q9H361 631 aaKnown RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 SERHL2Q9H4I8 314 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 EPS8L2Q9H6S3 715 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 KLC4Q9NSK0 619 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 KCTD5Q9NXV2 234 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 LPAR3Q9UBY5 353 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 RAI2Q9Y5P3 530 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 PIAS3Q9Y6X2 628 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MYO18AQ92614 2054 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 PTPRQQ9UMZ3 2332 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 TMEM150BA6NC51 233 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 J3KTA2 159 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 YY2O15391 372 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 HMMRO75330 724 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 STAM2O75886 525 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 FAM155BO75949 473 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 VNN1O95497 513 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ITGAMP11215 1152 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CEACAM1P13688 526 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CD19P15391 556 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 BLOC1S1P78537 153 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 FOXE3Q13461 319 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 BECN1Q14457 450 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ACOX1Q15067 660 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 PON2Q15165 354 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 PTPRRQ15256 657 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ALX1Q15699 326 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 TBCCQ15814 346 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 FAM78AQ5JUQ0 283 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 MIIPQ5JXC2 388 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 KIAA0895LQ68EN5 471 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CLEC9AQ6UXN8 241 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CYB5R4Q7L1T6 521 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 PLPPR4Q7Z2D5 763 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CAND1Q86VP6 1230 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 RAB11FIP4Q86YS3 637 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 SLC44A2Q8IWA5 706 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 SPEM1Q8N4L4 309 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 METTL25Q8N6Q8 603 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 TOR1AIP2Q8NFQ8 470 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ESR2Q92731 530 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CUL5Q93034 780 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ZFYVE19Q96K21 471 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CAMK1GQ96NX5 476 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 HAPLN3Q96S86 360 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 TRMT61BQ9BVS5 477 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 APOL6Q9BWW8 343 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF334Q9HCZ1 680 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 SAYSD1Q9NPB0 183 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 CASS4Q9NQ75 786 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF302Q9NR11 478 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 MAP3K20Q9NYL2 800 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 TESQ9UGI8 421 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 STEAP1Q9UHE8 339 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 PIN4Q9Y237 131 aaKnown RBP5.73□□□□□ -1.49
SF3B3-214ENST00000572365 NEUROG3Q9Y4Z2 214 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 UBIAD1Q9Y5Z9 338 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 NCANO14594 1321 aa5.73□□□□□ -1.49
SF3B3-214ENST00000572365 HELZP42694 1942 aaKnown RBP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 VWC2LB2RUY7 222 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 MPPED1O15442 326 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 ONECUT2O95948 504 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 IL6RP08887 468 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 DARSP14868 501 aaKnown RBP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 U2AF2P26368 475 aaKnown RBP eCLIP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 KIF5BP33176 963 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 LIPAP38571 399 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 GPC3P51654 580 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 AP2B1P63010 937 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 DGCR2P98153 550 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 EIF2B5Q13144 721 aaKnown RBP5.72□□□□□ -1.49
SF3B3-214ENST00000572365 GRM4Q14833 912 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 TAF5Q15542 800 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 TIGD6Q17RP2 521 aa5.72□□□□□ -1.49
SF3B3-214ENST00000572365 PLK5Q496M5 336 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms