RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 IL12RB2Q99665 862 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 LGR4Q9BXB1 951 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 SLC13A1Q9BZW2 595 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 USP29Q9HBJ7 922 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 NT5MQ9NPB1 228 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 PTPRQQ9UMZ3 2332 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 EME2A4GXA9 379 aaPredicted RBP14.69□□□□□ -0.06
FANCA-220ENST00000566409 TMEM202A6NGA9 273 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 C3orf70A6NLC5 250 aaPredicted RBP14.69□□□□□ -0.06
FANCA-220ENST00000566409 FZD6O60353 706 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PGLSO95336 258 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 GP1BAP07359 652 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PDHA1P08559 390 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 KRT7P08729 469 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 TGM2P21980 687 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 KDELR1P24390 212 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 SRP54P61011 504 aaKnown RBP14.69□□□□□ -0.06
FANCA-220ENST00000566409 RTP5Q14D33 572 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 RALGPS1Q5JS13 557 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PERM1Q5SV97 790 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 FAM182AQ5T1J6 154 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 RD3Q7Z3Z2 195 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PDXPQ96GD0 296 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 CCDC42Q96M95 316 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 TSGA13Q96PP4 275 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 SEMA3CQ99985 751 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 ZNHIT6Q9NWK9 470 aaKnown RBP14.69□□□□□ -0.06
FANCA-220ENST00000566409 PHTF1Q9UMS5 762 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PPIL1Q9Y3C6 166 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 PCDHB1Q9Y5F3 818 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 RAI2Q9Y5P3 530 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 UNC13CQ8NB66 2214 aa14.69□□□□□ -0.06
FANCA-220ENST00000566409 BPTFQ12830 3046 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 CPED1A4D0V7 1026 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 NPIPB15A6NHN6 443 aaPredicted RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 MATN3O15232 486 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 MTA2O94776 668 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 HEXIM1O94992 359 aaKnown RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 CPP00450 1065 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 CCNCP24863 283 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 HTR1BP28222 390 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 VIPR1P32241 457 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 DUSP3P51452 185 aaPredicted RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 ACOX1Q15067 660 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 C6orf132Q5T0Z8 1188 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 ALG1LQ6GMV1 187 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 ESRP1Q6NXG1 681 aaKnown RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 PNCKQ6P2M8 343 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 C19orf48Q6RUI8 117 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 EFL1Q7Z2Z2 1120 aaKnown RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 TSPAN33Q86UF1 283 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 PAF1Q8N7H5 531 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 ARRDC2Q8TBH0 407 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 NSMCE1Q8WV22 266 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 OR1E3Q8WZA6 343 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 FATE1Q969F0 183 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 NXPE2Q96DL1 559 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 SCRN2Q96FV2 425 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 WDR92Q96MX6 357 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 RNF157Q96PX1 679 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 MCCC1Q96RQ3 725 aaPredicted RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 NRSN2Q9GZP1 204 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 FGF22Q9HCT0 170 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 MRPL40Q9NQ50 206 aaKnown RBP14.68□□□□□ -0.06
FANCA-220ENST00000566409 DTLQ9NZJ0 730 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 DGKBQ9Y6T7 804 aa14.68□□□□□ -0.06
FANCA-220ENST00000566409 A0A1W2PQ67 120 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 TLX3O43711 291 aaPredicted RBP14.67□□□□□ -0.06
FANCA-220ENST00000566409 RASGRP1O95267 797 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 PRLP01236 227 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 FUCA1P04066 466 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 HLA-DQB2P05538 268 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 ANXA6P08133 673 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 HOXC4P09017 264 aaPredicted RBP14.67□□□□□ -0.06
FANCA-220ENST00000566409 ALPIP09923 528 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 CTPS1P17812 591 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 ETV3P41162 512 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 BLKP51451 505 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 KIAA1024LP59773 190 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 DSC2Q02487 901 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 NIPAL4Q0D2K0 466 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 NR0B2Q15466 257 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 IFI16Q16666 785 aaKnown RBP14.67□□□□□ -0.06
FANCA-220ENST00000566409 TSR1Q2NL82 804 aaKnown RBP14.67□□□□□ -0.06
FANCA-220ENST00000566409 ARMC12Q5T9G4 340 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 SARM1Q6SZW1 724 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 CRTC1Q6UUV9 634 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 RFLNAQ6ZTI6 216 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 Q6ZVL8 140 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 MAP7D3Q8IWC1 876 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 FSTL5Q8N475 847 aaPredicted RBP14.67□□□□□ -0.06
FANCA-220ENST00000566409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.67□□□□□ -0.06
FANCA-220ENST00000566409 PLD5Q8N7P1 536 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 RBM22Q9NW64 420 aaKnown RBP eCLIP14.67□□□□□ -0.06
FANCA-220ENST00000566409 KLQ9UEF7 1012 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 LCMT1Q9UIC8 334 aa14.67□□□□□ -0.06
FANCA-220ENST00000566409 LRRD1A4D1F6 860 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms