RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 SEMA3AQ14563 771 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CYTH1Q15438 398 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 TRIM60Q495X7 471 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 FRMD7Q6ZUT3 714 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SLC39A11Q8N1S5 342 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CPSF7Q8N684 471 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 OR4L1Q8NH43 312 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CATSPERZQ9NTU4 200 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 NLE1Q9NVX2 485 aaPredicted RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 CDYLQ9Y232 598 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 LRRC42Q9Y546 428 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SPO11Q9Y5K1 396 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 KIAA1671Q9BY89 1806 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 LOC100653049A0A140TA62 436 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SLC22A2O15244 555 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 KRT34O76011 436 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CRTAMO95727 393 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 JUNP05412 331 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 RPSAP08865 295 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 ZNF140P52738 457 aaPredicted RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 VEPH1Q14D04 833 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 RALGPS1Q5JS13 557 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SPOUT1Q5T280 376 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 GPR158Q5T848 1215 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CXorf57Q6NSI4 855 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 PIM3Q86V86 326 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 ACTRT2Q8TDY3 377 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CDKN2AIPNLQ96HQ2 116 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 EXOC2Q96KP1 924 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 PPP1R36Q96LQ0 422 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 ZNF558Q96NG5 402 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 ZNF570Q96NI8 536 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 DDX50Q9BQ39 737 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 HERC2P3Q9BVR0 1158 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 ZNF385DQ9H6B1 395 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 SCUBE2Q9NQ36 999 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 STX18Q9P2W9 335 aaKnown RBP19.55■□□□□ 0.72
CDH5-204ENST00000563425 SSX2IPQ9Y2D8 614 aa19.55■□□□□ 0.72
CDH5-204ENST00000563425 CBX4O00257 560 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 PRLP01236 227 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 TIAL1Q01085 375 aaKnown RBP eCLIP19.54■□□□□ 0.72
CDH5-204ENST00000563425 BTKQ06187 659 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 RAB33AQ14088 237 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 TYSND1Q2T9J0 566 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 RNF219Q5W0B1 726 aaPredicted RBP19.54■□□□□ 0.72
CDH5-204ENST00000563425 C16orf59Q7L2K0 433 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 SLC22A9Q8IVM8 553 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 SH3RF2Q8TEC5 729 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 TMEM169Q96HH4 297 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 RSRC1Q96IZ7 334 aaKnown RBP19.54■□□□□ 0.72
CDH5-204ENST00000563425 LENG8Q96PV6 779 aaPredicted RBP19.54■□□□□ 0.72
CDH5-204ENST00000563425 RTKNQ9BST9 563 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 TDRD1Q9BXT4 1180 aaKnown RBP19.54■□□□□ 0.72
CDH5-204ENST00000563425 CYP4F12Q9HCS2 524 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 STOML2Q9UJZ1 356 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 ARHGAP26Q9UNA1 814 aa19.54■□□□□ 0.72
CDH5-204ENST00000563425 TMEM233B4DJY2 109 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 F11P03951 625 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 ITGAXP20702 1163 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 PSMA3P25788 255 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 PIK3R1P27986 724 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 ADSLP30566 484 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 MNX1P50219 401 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 SUOXP51687 545 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 STC1P52823 247 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 SLC34A1Q06495 639 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 CCDC6Q16204 474 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 PDCD2Q16342 344 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 SH2D4BQ5SQS7 431 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 PGM2L1Q6PCE3 622 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 SDCCAG8Q86SQ7 713 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 ISCA2Q86U28 154 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 HERC6Q8IVU3 1022 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 TOP1MTQ969P6 601 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 ZNF689Q96CS4 500 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 RMDN1Q96DB5 314 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 MAELQ96JY0 434 aaKnown RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 POPDC3Q9HBV1 291 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 TBX21Q9UL17 535 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 TRPC5OSA6NMA1 111 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 CCNT2O60583 730 aaKnown RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 TBX10O75333 385 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 PENKP01210 267 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 SLC4A1P02730 911 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDH5-204ENST00000563425 SP100P23497 879 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 SULT2A1Q06520 285 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 TWF1Q12792 350 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 CUL3Q13618 768 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 TAF1AQ15573 450 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 C1orf146Q5VVC0 180 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 ZNF783Q6ZMS7 281 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 DNAJB7Q7Z6W7 309 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 TMEM150AQ86TG1 271 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 MYLK4Q86YV6 388 aaPredicted RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 ZFRQ96KR1 1074 aaKnown RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 MUC3BQ9H195 1237 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 ALG9Q9H6U8 611 aa19.53■□□□□ 0.72
CDH5-204ENST00000563425 EML4Q9HC35 981 aaKnown RBP19.53■□□□□ 0.72
CDH5-204ENST00000563425 INTS10Q9NVR2 710 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms