RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 TMEM109Q9BVC6 243 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 FRMD8P1Q9BZ68 369 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 GCOM2Q9BZD3 368 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 MIS12Q9H081 205 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 NEUROG2Q9H2A3 272 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 PABPC3Q9H361 631 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 IFT22Q9H7X7 185 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 TMBIM4Q9HC24 238 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 DMRT3Q9NQL9 472 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 DDX56Q9NY93 547 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 GRHL1Q9NZI5 618 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 FLRT1Q9NZU1 646 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 MTRF1LQ9UGC7 380 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 SIX4Q9UIU6 781 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 DRG1Q9Y295 367 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 NFS1Q9Y697 457 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 NLRC5Q86WI3 1866 aa4.55□□□□□ -1.68
UBE2D3-230ENST00000510599 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 HAS3O00219 553 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TJP3O95049 919 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 GAS8O95995 478 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CALCAP01258 141 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 VTNP04004 478 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 IVLP07476 585 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 GJB1P08034 283 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 KRT19P08727 400 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 KRT7P08729 469 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 FAM163BP0C2L3 166 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 MYZAPP0CAP1 466 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 ZNF286BP0CG31 522 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 SETSIPP0DME0 302 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CAPN2P17655 700 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CD58P19256 250 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PCSK1P29120 753 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PTGER1P34995 402 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 RPL21P46778 160 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 LMAN1P49257 510 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CPT1AP50416 773 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PMS2P54278 862 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 GYS2P54840 703 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 SNX16P57768 344 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 OSTNP61366 133 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 MYO1EQ12965 1108 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PTK6Q13882 451 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 LLGL1Q15334 1064 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 ZBTB6Q15916 424 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TAZQ16635 292 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TTMPQ5BVD1 217 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 XKR4Q5GH76 650 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CEP85LQ5SZL2 805 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DNAJC24Q6P3W2 148 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 NOTUMQ6P988 496 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DCUN1D2Q6PH85 259 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 RHBDF2Q6PJF5 856 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 LCLAT1Q6UWP7 414 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 ALKAL1Q6UXT8 129 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TRMT10CQ7L0Y3 403 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CLNKQ7Z7G1 428 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 AMIGO2Q86SJ2 522 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 HOOK3Q86VS8 718 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 UNC93AQ86WB7 457 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CCDC105Q8IYK2 499 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 NME8Q8N427 588 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 LRRC52Q8N7C0 313 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 SLC4A11Q8NBS3 891 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TBC1D15Q8TC07 691 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CCHCR1Q8TD31 782 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 UBLCP1Q8WVY7 318 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 USP6NLQ92738 828 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TMEM125Q96AQ2 219 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 SNF8Q96H20 258 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 HPDLQ96IR7 371 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 TRIM51Q9BSJ1 452 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 KATNAL1Q9BW62 490 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 OSBPL8Q9BZF1 889 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 ROPN1BQ9BZX4 212 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DCLK3Q9C098 648 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DNAI2Q9GZS0 605 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DPH5Q9H2P9 285 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 GSTO2Q9H4Y5 243 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 ROPN1Q9HAT0 212 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 DPP3Q9NY33 737 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CWC15Q9P013 229 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CALCOCO1Q9P1Z2 691 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 CHORDC1Q9UHD1 332 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PRDM4Q9UKN5 801 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 BARX2Q9UMQ3 279 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 MAPRE3Q9UPY8 281 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 APOBEC2Q9Y235 224 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 RUVBL1Q9Y265 456 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 NEU2Q9Y3R4 380 aa4.54□□□□□ -1.68
UBE2D3-230ENST00000510599 PRAMEF33A0A0G2JMD5 474 aa4.53□□□□□ -1.68
UBE2D3-230ENST00000510599 TCRBV7S2A1N4TA0A589 114 aa4.53□□□□□ -1.68
UBE2D3-230ENST00000510599 FAM171A2A8MVW0 826 aa4.53□□□□□ -1.68
UBE2D3-230ENST00000510599 O00370 1275 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms