RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 KDELC1Q6UW63 502 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 PRPF39Q86UA1 669 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 OR2AP1Q8NGE2 309 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 TTC25Q96NG3 672 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 FICDQ9BVA6 458 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 PABPC3Q9H361 631 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 CASS4Q9NQ75 786 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 SLC6A14Q9UN76 642 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 NCKAP1Q9Y2A7 1128 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 ATXN2Q99700 1313 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 MEI4A8MW99 385 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 K7ERQ8 282 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 TM4SF5O14894 197 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 SMAD6O43541 496 aaKnown RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 MMP2P08253 660 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 HLA-DPA1P20036 260 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 SLC8A1P32418 973 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 ACSL1P33121 698 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 MAGEA3P43357 314 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 MAGEA4P43358 317 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 RGRP47804 291 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 FOXK2Q01167 660 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 RAD51Q06609 339 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 GRM3Q14832 879 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 DLG2Q15700 870 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 PCSK7Q16549 785 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 CCDC38Q502W7 563 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 FNBP1LQ5T0N5 605 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 ZNF534Q76KX8 674 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 HDXQ7Z353 690 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 SRLQ86TD4 932 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 MMAAQ8IVH4 418 aaKnown RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 ZBED8Q8IZ13 594 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 STK40Q8N2I9 435 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 FEM1CQ96JP0 617 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 MRGPRX2Q96LB1 330 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
BRAT1-205ENST00000473879 NOD2Q9HC29 1040 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 CAPN10Q9HC96 672 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 BFARQ9NZS9 450 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 SUSD2Q9UGT4 822 aa13.34□□□□□ -0.27
BRAT1-205ENST00000473879 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ALOX15BO15296 676 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 MID1O15344 667 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 USP12O75317 370 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 SEMA4FO95754 770 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ADH1BP00325 375 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CPP00450 1065 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 EPOP01588 193 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 GNSP15586 552 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 TSHRP16473 764 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 C5AR1P21730 350 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ADRA1AP35348 466 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 NPY2RP49146 381 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CDK18Q07002 472 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CARD16Q5EG05 197 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CFAP58Q5T655 872 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ATXN7L2Q5T6C5 722 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ARMC3Q5W041 872 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 NCEH1Q6PIU2 408 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 DSG4Q86SJ6 1040 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 CCNJLQ8IV13 435 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 OR8D1Q8WZ84 308 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 NAT9Q9BTE0 207 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 TNKS2Q9H2K2 1166 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 ATP13A3Q9H7F0 1226 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 TMEM9BQ9NQ34 198 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 SAMD15Q9P1V8 674 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 FZD4Q9ULV1 537 aa13.33□□□□□ -0.28
BRAT1-205ENST00000473879 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 SDR42E2A6NKP2 422 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 C4orf47A7E2U8 309 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 SOCS5O75159 536 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 SPAG6O75602 509 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 AGTP01019 485 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 CFIP05156 583 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 FGF1P05230 155 aa13.32□□□□□ -0.28
BRAT1-205ENST00000473879 ENGP17813 658 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms