RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 DKK2Q9UBU2 259 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 ZNF148Q9UQR1 794 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 CARD8Q9Y2G2 431 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 OAS3Q9Y6K5 1087 aaKnown RBP5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 XDHP47989 1333 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 SPATA31A5Q5VU36 1347 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 SPATA31A6Q5VVP1 1343 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 SPATA31A7Q8IWB4 1347 aa5.37□□□□□ -1.55
TM9SF3-202ENST00000443638 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 NDC80O14777 642 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 SLC30A4O14863 429 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 OGG1O15527 345 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 DAB1O75553 588 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 BCAS2O75934 225 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ZNF182P17025 639 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ADRA2CP18825 462 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 TYMPP19971 482 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ACHEP22303 614 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 FPR3P25089 353 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 HOXA11P31270 313 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 SHMT1P34896 483 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 PTGER1P34995 402 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 KHKP50053 298 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 NAGLUP54802 743 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 GP2P55259 537 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 POLR2FP61218 127 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ASIC1P78348 528 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 GRSF1Q12849 480 aaKnown RBP eCLIP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 GRIK3Q13003 919 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 RESTQ13127 1097 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 NAB2Q15742 525 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 USP41Q3LFD5 358 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 KBTBD12Q3ZCT8 623 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 SPDYE7PQ495Y7 208 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 GLE1Q53GS7 698 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ARL13AQ5H913 290 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 C6orf136Q5SQH8 315 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 TCTN3Q6NUS6 607 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 FBXO42Q6P3S6 717 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ANKRD16Q6P6B7 361 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ZNF551Q7Z340 670 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 HOOK3Q86VS8 718 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 KLBQ86Z14 1044 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 PAQR4Q8N4S7 273 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 AFAP1Q8N556 730 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 KDM1BQ8NB78 822 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ZNF540Q8NDQ6 660 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 RBM15BQ8NDT2 890 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 OR4N2Q8NGD1 307 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 OR52N4Q8NGI2 321 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 GRAPLQ8TC17 118 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 TRPC4APQ8TEL6 797 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 PGBD1Q96JS3 809 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ADAD1Q96M93 576 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 RUNDC3BQ96NL0 473 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 BBS4Q96RK4 519 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ABHD6Q9BV23 337 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ADGRE3Q9BY15 652 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ZNF768Q9H5H4 540 aaKnown RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 AKIP1Q9NQ31 210 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 IL19Q9UHD0 177 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 IL17BQ9UHF5 180 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 KCTD3Q9Y597 815 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 ARHGEF40Q8TER5 1519 aa5.36□□□□□ -1.55
TM9SF3-202ENST00000443638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 OOEPA6NGQ2 149 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 RNASET2O00584 256 aaKnown RBP5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 IFIT3O14879 490 aaKnown RBP5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TXNL1O43396 289 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 NCR1O76036 304 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 CDKL5O76039 1030 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TRUB2O95900 331 aaKnown RBP5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 BCL10O95999 233 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 GBAP04062 536 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 FAM58BPP0C7Q3 252 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 PRLRP16471 622 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TFEBP19484 476 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 CYP2C18P33260 490 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 CENPAP49450 140 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 PDE1AP54750 535 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 SLURP1P55000 103 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TAS2R40P59535 323 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 KLF10Q13118 480 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 BMPR2Q13873 1038 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 SNAPC1Q16533 368 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 C6orf141Q5SZD1 244 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 NHLRC1Q6VVB1 395 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 POLNQ7Z5Q5 900 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 CENPVQ7Z7K6 275 aaPredicted RBP5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TRIM74Q86UV6 250 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 PEX5LQ8IYB4 626 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 SFRP1Q8N474 314 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 HDDC3Q8N4P3 179 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 TMEM217Q8N7C4 229 aa5.35□□□□□ -1.55
TM9SF3-202ENST00000443638 IP6K1Q92551 441 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms