RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 HPS4Q9NQG7 708 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 GDE1Q9NZC3 331 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 INTS6Q9UL03 887 aaKnown RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 HEMK1Q9Y5R4 338 aaPredicted RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 FCHO1O14526 889 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 INSIG1O15503 277 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 DCNP07585 359 aaKnown RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 ABCG1P45844 678 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 GALK1P51570 392 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 IRX4P78413 519 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 PTPRCAPQ14761 206 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 MYBPC3Q14896 1274 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 EML3Q32P44 896 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 FUT11Q495W5 492 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.41e-15■■■■□ 22.2
PUM1-207ENST00000440538 FNBP1LQ5T0N5 605 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 HTR3DQ70Z44 454 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 CDKL3Q8IVW4 592 aaPredicted RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 SPNS2Q8IVW8 549 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 ZNF276Q8N554 614 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 LEMD2Q8NC56 503 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 RBM15BQ8NDT2 890 aaKnown RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 LPCAT1Q8NF37 534 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 ABTB1Q969K4 478 aaPredicted RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 PGAP3Q96FM1 320 aaPredicted RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 MPP4Q96JB8 637 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 FICDQ9BVA6 458 aa6.32□□□□□ -1.4
PUM1-207ENST00000440538 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
PUM1-207ENST00000440538 CCDC160A6NGH7 325 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 SLC9A3R1O14745 358 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 TMCC1O94876 653 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 KAT7O95251 611 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 FGF19O95750 216 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TROVE2P10155 538 aaKnown RBP eCLIP6.31□□□□□ -1.4
PUM1-207ENST00000440538 ZFXP17010 805 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 MX2P20592 715 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 XPAP23025 273 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 ALDH18A1P54886 795 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 OCRLQ01968 901 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 BTKQ06187 659 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 UBAP2LQ14157 1087 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 CCNG2Q16589 344 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 ITPRIPL2Q3MIP1 535 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 LIN52Q52LA3 116 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 SFT2D3Q587I9 215 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 GRAMD4Q6IC98 578 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 Q6ZS52 159 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 MFSD6LQ8IWD5 586 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 ARHGAP12Q8IWW6 846 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 ALLCQ8N6M5 410 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 POU5F2Q8N7G0 328 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TTC13Q8NBP0 860 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 CHST14Q8NCH0 376 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TSSK1BQ9BXA7 367 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 THEGQ9P2T0 379 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 SHROOM3Q8TF72 1996 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TRAFD1O14545 582 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 MUSKO15146 869 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 PDE5AO76074 875 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 PTPN3P26045 913 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 METAP1P53582 386 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 KLF1Q13351 362 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 HSF5Q4G112 596 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 CES4AQ5XG92 561 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 TMEM215Q68D42 235 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 CXorf57Q6NSI4 855 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 KIAA1324Q6UXG2 1013 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 RNF111Q6ZNA4 994 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 MMAAQ8IVH4 418 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 CPA6Q8N4T0 437 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 OR52K1Q8NGK4 314 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 CCDC124Q96CT7 223 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 ANKRD27Q96NW4 1050 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 ECSITQ9BQ95 431 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 C2orf49Q9BVC5 232 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 COMMD8Q9NX08 183 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 STX18Q9P2W9 335 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 PPARGC1AQ9UBK2 798 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 AK5Q9Y6K8 562 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 A0A1W2PPC1 479 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 FGF10O15520 208 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
PUM1-207ENST00000440538 TCEA3O75764 348 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 PDGFBP01127 241 aaPredicted RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 DDX6P26196 483 aaKnown RBP eCLIP6.31□□□□□ -1.41e-12■□□□□ 8.5
PUM1-207ENST00000440538 MAT2AP31153 395 aaKnown RBP6.31□□□□□ -1.4
PUM1-207ENST00000440538 EPHA5P54756 1037 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 SLC25A3Q00325 362 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 DLG1Q12959 904 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 CDC16Q13042 620 aa6.31□□□□□ -1.4
PUM1-207ENST00000440538 SMAD4Q13485 552 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms