RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 RANBP9Q96S59 729 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 TDRD1Q9BXT4 1180 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ROPN1BQ9BZX4 212 aaPredicted RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ROPN1Q9HAT0 212 aaPredicted RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 NOD2Q9HC29 1040 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 FETUBQ9UGM5 382 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ERVW-1Q9UQF0 538 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ACTL7AQ9Y615 435 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 NFS1Q9Y697 457 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 LAMA5O15230 3695 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 MUC22E2RYF6 1773 aaPredicted RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 FAM237BA0A1B0GVD1 139 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 OPA1O60313 960 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 USP12O75317 370 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 BANF1O75531 89 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 TCEA3O75764 348 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 APBB3O95704 486 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 NDST3O95803 873 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 AGTP01019 485 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 IVLP07476 585 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 DLDP09622 509 aaKnown RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 MGAT1P26572 445 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 STX2P32856 288 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 GJA4P35212 333 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 NNMTP40261 264 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 OPRD1P41143 372 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 DHPSP49366 369 aaPredicted RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SCNN1BP51168 640 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SESN2P58004 480 aaPredicted RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 GPX6P59796 221 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 RPL26P61254 145 aaKnown RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 IHHQ14623 411 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 GRM3Q14832 879 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SLC1A5Q15758 541 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 PCSK7Q16549 785 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 TMEM215Q68D42 235 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 ARMCX6Q7L4S7 300 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SRLQ86TD4 932 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 C12orf40Q86WS4 652 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 ANKMY2Q8IV38 441 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 TERB1Q8NA31 727 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 OR2AP1Q8NGE2 309 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 IFT43Q96FT9 208 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 MRGPRX3Q96LB0 322 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 TUBGCP5Q96RT8 1024 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 TRIB3Q96RU7 358 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 CCDC77Q9BR77 488 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SLC32A1Q9H598 525 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 VPS37BQ9H9H4 285 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 MRM3Q9HC36 420 aaKnown RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 FSCN3Q9NQT6 498 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 SAMD15Q9P1V8 674 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 RPL26L1Q9UNX3 145 aaKnown RBP11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 MAD1L1Q9Y6D9 718 aa11.8□□□□□ -0.52
AC009404.1-202ENST00000439955 A0A1W2PQ67 120 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 WASH3PC4AMC7 463 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 K7ERQ8 282 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 AGPSO00116 658 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 SMAD6O43541 496 aaKnown RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 SOCS5O75159 536 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 USP1O94782 785 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 CAPNS1P04632 268 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ATXN1LP0C7T5 689 aaKnown RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 NUMBP49757 651 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 GALK1P51570 392 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 FAM193AP78312 1265 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 RAD51Q06609 339 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 LAMB3Q13751 1172 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 RASA2Q15283 850 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 KLHL38Q2WGJ6 581 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 PCID2Q5JVF3 399 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 C3orf62Q6ZUJ4 267 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 GSDMBQ8TAX9 411 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 UCMAQ8WVF2 138 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 EZH1Q92800 747 aaPredicted RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 PEX13Q92968 403 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 EXOC2Q96KP1 924 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 SH3GL2Q99962 352 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 KIFC1Q9BW19 673 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ADGRE3Q9BY15 652 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 CPEB1Q9BZB8 566 aaKnown RBP11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ACSS3Q9H6R3 686 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 MED4Q9NPJ6 270 aa11.79□□□□□ -0.52
AC009404.1-202ENST00000439955 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms