RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 ETV3LQ6ZN32 361 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 PRPF39Q86UA1 669 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 GTF2IRD2Q86UP8 949 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 MIB1Q86YT6 1006 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 BRSK2Q8IWQ3 736 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 ANKRD42Q8N9B4 389 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 IPCEF1Q8WWN9 437 aaPredicted RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 DIO2Q92813 273 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 TMX3Q96JJ7 454 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 SRPK1Q96SB4 655 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 SELENOOQ9BVL4 669 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 CPEB1Q9BZB8 566 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 PABPC3Q9H361 631 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 LRRN3Q9H3W5 708 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 SH3GLB2Q9NR46 395 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 FBXO8Q9NRD0 319 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 TOMM22Q9NS69 142 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 TBC1D22BQ9NU19 505 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 DCAF16Q9NXF7 216 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 TRMT1Q9NXH9 659 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 UTP6Q9NYH9 597 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 XPO7Q9UIA9 1087 aaKnown RBP3.81□□□□□ -1.8
CNGA1-203ENST00000420489 X6R8D5 127 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 ESPL1Q14674 2120 aa3.81□□□□□ -1.8
CNGA1-203ENST00000420489 TMEM110-MUSTN1A8MSY1 372 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 K7EM74 188 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ZBTB5O15062 677 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 SNX2O60749 519 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 RHOBTB3O94955 611 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 KLKB1P03952 638 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 FUCA1P04066 466 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 SDSP20132 328 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TNFAIP3P21580 790 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TKTP29401 623 aaKnown RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 DGKQP52824 942 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 GABPB1Q06547 395 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 NT5DC1Q5TFE4 455 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 KIAA0930Q6ICG6 404 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 PPP4R3AQ6IN85 833 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 CEACAM20Q6UY09 585 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 MED25Q71SY5 747 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 KIAA0907Q7Z7F0 614 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TMEM150AQ86TG1 271 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 CEP57Q86XR8 500 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 Q8N1Y9 231 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 FAR1Q8WVX9 515 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ASB12Q8WXK4 309 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 B3GALT6Q96L58 329 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 PPP1R10Q96QC0 940 aaKnown RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 MCMBPQ9BTE3 642 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ESRP2Q9H6T0 727 aaKnown RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 DCTPP1Q9H773 170 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 OGFRQ9NZT2 677 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 IL17CQ9P0M4 197 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ATP8A1Q9Y2Q0 1164 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 HS3ST3A1Q9Y663 406 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 SLC12A8A0AV02 714 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TGFB1I1O43294 461 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 DKC1O60832 514 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 IPO7O95373 1038 aaKnown RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 PLS3P13797 630 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 PPM1FP49593 454 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 SNX16P57768 344 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 MCL1Q07820 350 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TRIM29Q14134 588 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ACOX1Q15067 660 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 CEBPEQ15744 281 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 FAM133BQ5BKY9 247 aaKnown RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 CT47A1Q5JQC4 288 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 SYVN1Q86TM6 617 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 CXorf67Q86X51 503 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TMPRSS6Q8IU80 811 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 LGI4Q8N135 537 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 OR8H2Q8N162 312 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 FSTL5Q8N475 847 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ZNF557Q8N988 423 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 PHOSPHO1Q8TCT1 267 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 KIF1BPQ96EK5 621 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ZNF396Q96N95 335 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 TRIM6Q9C030 488 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ANLNQ9NQW6 1124 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 RASSF1Q9NS23 344 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 RABL2AQ9UBK7 228 aaPredicted RBP3.8□□□□□ -1.8
CNGA1-203ENST00000420489 GTF2A1LQ9UNN4 478 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 MYRFQ9Y2G1 1151 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ZNF835Q9Y2P0 537 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ATP6V1DQ9Y5K8 247 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 IKBKGQ9Y6K9 419 aa3.8□□□□□ -1.8
CNGA1-203ENST00000420489 ESYT3A0FGR9 886 aa3.79□□□□□ -1.8
CNGA1-203ENST00000420489 C9orf118A6NHY6 69 aa3.79□□□□□ -1.8
CNGA1-203ENST00000420489 ZWINTO95229 277 aa3.79□□□□□ -1.8
CNGA1-203ENST00000420489 VNN2O95498 520 aa3.79□□□□□ -1.8
CNGA1-203ENST00000420489 PLA2G1BP04054 148 aaKnown RBP3.79□□□□□ -1.8
CNGA1-203ENST00000420489 HAPLN1P10915 354 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-203ENST00000420489 ATF4P18848 351 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-203ENST00000420489 RPL13P26373 211 aaKnown RBP3.79□□□□□ -1.8
CNGA1-203ENST00000420489 UBA7P41226 1012 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms