RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CA9Q16790 459 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 AFMIDQ63HM1 303 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 VASH2Q86V25 355 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 TMEM159Q96B96 161 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 CMKLR1Q99788 373 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 AGPAT1Q99943 283 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 SEMA6CQ9H3T2 930 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 DPEP2Q9H4A9 486 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 CYP4F12Q9HCS2 524 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 DONSONQ9NYP3 566 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 LRRK2Q5S007 2527 aa13.84□□□□□ -0.19
CXCL12-202ENST00000374426 ARHGAP42A6NI28 874 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 C9orf172C9J069 976 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-202ENST00000374426 TPM2P07951 284 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 ITGB6P18564 788 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-202ENST00000374426 KELP23276 732 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 B4GALNT1Q00973 533 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 BCL2L1Q07817 233 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 ARHGEF7Q14155 803 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 DCUN1D2Q6PH85 259 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 XKR5Q6UX68 686 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 ARHGAP36Q6ZRI8 547 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 DPPA4Q7L190 304 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 DTX1Q86Y01 620 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 MCOLN2Q8IZK6 566 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 NPWQ8N729 165 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 NEK11Q8NG66 645 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 USP7Q93009 1102 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-202ENST00000374426 WDR26Q9H7D7 661 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 RDH14Q9HBH5 336 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 STARD5Q9NSY2 213 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 SEPT10Q9P0V9 454 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 AP4E1Q9UPM8 1137 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
CXCL12-202ENST00000374426 NBASA2RRP1 2371 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 A0A1W2PQC6 194 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 PRSS38A1L453 326 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 A8MX80 341 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 EEF2KO00418 725 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 B4GAT1O43505 415 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 FAM87AP0C7U9 286 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 MAPK10P53779 464 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 MAZP56270 477 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 POLR2LP62875 67 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 C16orf72Q14CZ0 275 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 MANEAQ5SRI9 462 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 PHF19Q5T6S3 580 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 RFX8Q6ZV50 586 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 C17orf82Q86X59 251 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 NRROSQ86YC3 692 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 ARFGAP1Q8N6T3 406 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 PCMTD1Q96MG8 357 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 PEBP4Q96S96 227 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 DHX35Q9H5Z1 703 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 SPATS2LQ9NUQ6 558 aaKnown RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
CXCL12-202ENST00000374426 HEMK1Q9Y5R4 338 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-202ENST00000374426 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 DFFAO00273 331 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 TEX33O43247 280 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 FUCA1P04066 466 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 MYCLP1P12525 358 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CCL4P13236 92 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CCNB1P14635 433 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 ERCC2P18074 760 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CSRP3P50461 194 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 SCNN1BP51168 640 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CYP4F2P78329 520 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 NFKB2Q00653 900 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 MAMLD1Q13495 774 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 RFTN1Q14699 578 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 ACOX1Q15067 660 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 AMZ1Q400G9 498 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 MAP9Q49MG5 647 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 CYP4V2Q6ZWL3 525 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-202ENST00000374426 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 PIM3Q86V86 326 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 PAF1Q8N7H5 531 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 KIAA1524Q8TCG1 905 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 GPBAR1Q8TDU6 330 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 SPOCK2Q92563 424 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 COQ10AQ96MF6 247 aa13.81□□□□□ -0.2
CXCL12-202ENST00000374426 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms